AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo14g00527 ATGCTCTTAGAGGGCAATGCCCTAGTTGAAGATCCTCAGTTGAGTAATCAGGCTCATGACAAGTCTGTTGCCCAGGTGGTGCACCGACCAGTTGCTCGTCTGGCCGCACCTGGCCTTTCATCTTTCAACCCTAACGACACCCCATCCTCACTACCCACCGTTGATGATTCATCATCATCTTCATCTTCGCACGTGCGATGCACGTGTTGTGATGAGGAGCTTCTTAGAGGGTCAAATTCACTTATTTGTATTTACTGCGGTGAATTAAATGATAGTAATAATGTTGTTAAAGATGATTTACTGTTTAAGAATACTAATGCTTATGGCTGGTTACTTCAATCTTTGAATTTTAATGGATCGGAAAGAGTTGGGTCGTTGGCTGAAGGAACTGGAATAAATGGAGGGCAGAGTCCTGCAGAAGATGAATTAAGTTTGTCCGAGCTTCTAGATTTGAAAATTGTATGGCGGGACGTGCCTAAAAGATCTGAAAGATATTCCCATGTCAAGACCTCTGTACTTAACAGTTCTTCGAGTCTTAGTAAAGCCGAGTTTGATGATTTCTTTGTAGAGTCAAAAAGAGCTACCGAGTCAGATGTACCCGAAGCACAACCAGTTGCTAACAAAACCGATCAAGATGCAGCCTCTGAGGGTCAAGAAAATCTTACTCTATTTCAGAATGTTTTGCATCCTGAGACATCTGTTACCTCCTCTATTGATGCGGGTGATGATGCTTCATCAGGTTGGAATGCAGACTTTCAGTCTGCAGATAATACGAAAGTGGAGAACGATACTACCAGATCATTTGACCCTTTTGTAGGTGCTAAAACTGATCTATCCGCTCACATGGATTCGGTTTTTGGACAGATGGAAGGGCTAAAAGACAGAAAACCGAAGGATGATTCAGACCTATTTCCTTCTGCAGATAAAGATTGGATTGAAGATGACCTTTTTGGGCAGATGGAAGGTCTTGATAACAAAAAAACGAACGTTGATTCAGATCCTTTCCCTTCTACTGGTGGAGATTGGGCTCAAGATGACCTTTTTGCCAACACGACCTCTGCAACTTTTCAGCAAGCTGAGCCGTTGGATTCAGTTGTTCAAGCAAATGACGGGTTTCCAGTTGTTCAAGCAACTTTTAAAAATGAAGGTCTTGATAACAAAAAAACGAACGTTGATTCAGATCCTTTCCCTTCTACTGGCGAGGATTGGGCTCAAGATGACTTTTTTGCCAACACGACCTCTGCAACTTTTCAGCAAGCTGAGCCGTTAGATCCAGTTGTTCAAGCAAATGACGGGTTTTCAGGTCATTCAAATGATCATGATTCAAAAGGTGTGGATGAAGAAGACTGGTTTAATGATGGTAATTGGCAGAAAAATAGTGCCAGTAATACTGCGGTCTCTCTGCAGGCTGACAAGTTAGACATGTTTGACAAGCATGATGACGGATCATTGCAGGATAATTTGAATGATAAATCTGCAGAAGGTGTCGATGTGGATTGGTTTGAAAATACAAACTGGCAGAAAAGTGCTACAAACAACACAACTATCAATAAAGATGATAATTCATTTGATATGAAACCGCAGAATGATGCAGTTTCTTCCTCGTCGTTGTTCAACGACTTGATTCAGAACGACAGTTCAGATCCTGATAATTCAAAGAAACAACAATCAGACGCCACTGACTGGTTCCAAGATAGTCAGTGGGCGATTGGTGCTTCTAGCTCTACTACTAATGTGGTGACCAACAAAGATGATGATGCGTTTGATGATTGGAACGATTTTACAAGCTCAACTGGTAATGAGAGAGTTGCTGCTGGTGACAAGATGTCAGAATTAAATCTCTTTTCATCTACAGCCGATACACGTGCACAAGAAGTGGATTTTGGCAACTTTTCACAGTCGGATCTATTTTCTGGTTCATTTAGTAATAAAAATCCAACTGATACTCAGGCAGGGTTTGATATCTTTTCACAAGTTTCTACAGCAAGCAGGAATGCTAATGTCGAAGCTGAAAATAGTGCCGAGAGACCAAAGAACGACGAGTTTTCCCTCAATGCATCTACAAGTCCGAATAATGATGTGCAGATGCTGTTGTCACAGATGCATGACTTGTCTTTTATGCTCAAGAGCGAGCTTTCAATCCCTTCGAGGCCGGATGATAGCCGTTCTTCTCACAGTTAA 2181 41.82 MLLEGNALVEDPQLSNQAHDKSVAQVVHRPVARLAAPGLSSFNPNDTPSSLPTVDDSSSSSSSHVRCTCCDEELLRGSNSLICIYCGELNDSNNVVKDDLLFKNTNAYGWLLQSLNFNGSERVGSLAEGTGINGGQSPAEDELSLSELLDLKIVWRDVPKRSERYSHVKTSVLNSSSSLSKAEFDDFFVESKRATESDVPEAQPVANKTDQDAASEGQENLTLFQNVLHPETSVTSSIDAGDDASSGWNADFQSADNTKVENDTTRSFDPFVGAKTDLSAHMDSVFGQMEGLKDRKPKDDSDLFPSADKDWIEDDLFGQMEGLDNKKTNVDSDPFPSTGGDWAQDDLFANTTSATFQQAEPLDSVVQANDGFPVVQATFKNEGLDNKKTNVDSDPFPSTGEDWAQDDFFANTTSATFQQAEPLDPVVQANDGFSGHSNDHDSKGVDEEDWFNDGNWQKNSASNTAVSLQADKLDMFDKHDDGSLQDNLNDKSAEGVDVDWFENTNWQKSATNNTTINKDDNSFDMKPQNDAVSSSSLFNDLIQNDSSDPDNSKKQQSDATDWFQDSQWAIGASSSTTNVVTNKDDDAFDDWNDFTSSTGNERVAAGDKMSELNLFSSTADTRAQEVDFGNFSQSDLFSGSFSNKNPTDTQAGFDIFSQVSTASRNANVEAENSAERPKNDEFSLNASTSPNNDVQMLLSQMHDLSFMLKSELSIPSRPDDSRSSHS 726
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chmo14g00527 726 MobiDBLite consensus disorder prediction 540 560 - -
Chmo14g00527 726 MobiDBLite consensus disorder prediction 40 64 - -
Chmo14g00527 726 MobiDBLite consensus disorder prediction 436 453 - -
Chmo14g00527 726 MobiDBLite consensus disorder prediction 413 463 - -
Chmo14g00527 726 MobiDBLite consensus disorder prediction 511 530 - -
Chmo14g00527 726 MobiDBLite consensus disorder prediction 669 691 - -
Chmo14g00527 726 PANTHER DENTIN SIALOPHOSPHOPROTEIN-RELATED 604 721 - -
Chmo14g00527 726 MobiDBLite consensus disorder prediction 37 64 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo14g00527 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
213576 Chmo14g00527 Chmo15g00389
225866 Chmo13g00548 Chmo14g00527
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chmo Chmo-Chr14:21980448 Chmo9g04649 Chmo-Chr9:251465445 dispersed
Chmo Chmo-Chr13:24909642 Chmo14g00527 Chmo-Chr14:21980448 wgd
Chmo Chmo-Chr14:21980448 Chmo15g00389 Chmo-Chr15:20230111 wgd