Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo14g00548 | ATGAAGCTATTGCCTAGTTTTCGAGACGTATCAAGTTCCGAAAAACATAGTTTGTTTATCAAGAAAATGAGTATGTGTTGTGTAGTGTTTGATTTTAACGACCCGTTAAAGAGTTTGAAAGAAAAAGATGTAAAGAAACAAACTTTACTTGAACTAGTTGAATATGTTTCTTCAGTAAGTTCCAAGTTTAATGAGGTTACAATTTTGGAGATAACGAAAATGGTGTCTGCTAATTTGTTTCGGTCATTACCTAACTTAAGTAATGAAAGTAAGTTGCCGGATATATATGATCAAGAAGATGACGAGTTTGTTATGGATCCTTCATGGCCACATCTTCAAGTTGTGTATGAGTTTTTGCTTAGGTTTGTGGCCTCATCAGAGACTGATGCTAAAATTGCGAAAAAGTATATAGATCAGTCGTTCGTGTTAAAATTGCTTGATCTTTTTGATTCTGAGGATCAAAGGGAAAGGGAGTATTTAAAGACGATTATGCATAGGATTTATGGCAAGTTTATGGTGCATCGGCCGTTTATTAGAAAAGCGATTAATAATATATTTTATCATTTTATTCTTGAGTCTGGTAAGCATAATGGGATAGCGGAAATACTTGAGCTTTTAGGTAGTAGTAATCAATGGATTTACGATGCCATTGAAGGAAGAACATAA | 666 | 33.78 | MKLLPSFRDVSSSEKHSLFIKKMSMCCVVFDFNDPLKSLKEKDVKKQTLLELVEYVSSVSSKFNEVTILEITKMVSANLFRSLPNLSNESKLPDIYDQEDDEFVMDPSWPHLQVVYEFLLRFVASSETDAKIAKKYIDQSFVLKLLDLFDSEDQREREYLKTIMHRIYGKFMVHRPFIRKAINNIFYHFILESGKHNGIAEILELLGSSNQWIYDAIEGRT | 221 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo14g00548 | 221 | SUPERFAMILY | ARM repeat | 17 | 209 | IPR016024 | - | |
| Chmo14g00548 | 221 | FunFam | Serine-threonine-protein phosphatase 2A 56 kDa regulatory subunit | 6 | 217 | - | - | |
| Chmo14g00548 | 221 | Gene3D | - | 6 | 213 | IPR011989 | - | |
| Chmo14g00548 | 221 | Pfam | Protein phosphatase 2A regulatory B subunit (B56 family) | 4 | 209 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) | |
| Chmo14g00548 | 221 | PANTHER | SERINE-THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B | 3 | 208 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo14g00548 | K11584 | serine/threonine-protein phosphatase 2A regulatory subunit B' |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr14:22845327 | Chmo15g00405 | Chmo-Chr15:20941920 | dispersed | |
| Chmo | Chmo-Chr13:25782679 | Chmo14g00548 | Chmo-Chr14:22845327 | wgd |