Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo14g00590 | ATGCCACCATTAAAAACCATATATCTAACCATCATATTCATTTTAATAATCCCATATCCAACAACTGGTGATCAATCCTATATCTCAATCTTAATAACCCAAAAGGGTCTTAATTTCACCAAAGATTTACTCATATCAAAAGCCTTATCATCACTTACTCCAACACCAATATCTGAAATTGTGAAAAATGTTAAGATACCTTTGATTGGTAAAGTGCATGTTGTTCTTAAAGATATTGGTATTAATGGGGTTCAAGTTGGGTCATCTGATGTTGTGCCTAGTGTTGGTGGTGTTGTGATTGTTGGTAATGGTGTTAGTTGTGAGTTGGAGGTCAAGTGGCATTATAGTTATGGGACTTGGGTTGGCCCGGTTTCGGTTTCGGATAGTGGGACTGCTTCTATTAAGGTTGATGGCATGGAAATCAAAGTAACACTAGACGTGGTGAATAAAGAAGGATCTATGAAACTTTCCATCGTGGAATGTAATTGTCATATAAATGATATCTCCATAGATTTAGATGGAGGAGCATCTTGGCTCTATCAAGGGATTGTGGATGCTTTTGAAGATGAAATACTCTCAGCAGTAGAAAAAGCAATTACCAAGACACTGAAAGCCGGAATTTCACACCTTGAATCAATGTTACAAACTCTTCCGAAACAAATCCCAGTGGATGATACTGCTTCATTAAATGTTACATTTGTTAACAACCCTTATACGAGCGACACTTCACTAGGCGTTGAGATAAATGGGTTGTTTATACAAAATAAAACCCACGCACATTCATACCACAATGGTTTGCAGCCACCAGTTTCTTGTTCAGAATCTTCAAAGATGATTGGAATTGCCTTAGATGAAGCTGTTTTTAAATCTGCATCTGCCTTATACTATAATGTGACTCCCCGAATCCTTATATCAGCTTTATTATAA | 927 | 36.89 | MPPLKTIYLTIIFILIIPYPTTGDQSYISILITQKGLNFTKDLLISKALSSLTPTPISEIVKNVKIPLIGKVHVVLKDIGINGVQVGSSDVVPSVGGVVIVGNGVSCELEVKWHYSYGTWVGPVSVSDSGTASIKVDGMEIKVTLDVVNKEGSMKLSIVECNCHINDISIDLDGGASWLYQGIVDAFEDEILSAVEKAITKTLKAGISHLESMLQTLPKQIPVDDTASLNVTFVNNPYTSDTSLGVEINGLFIQNKTHAHSYHNGLQPPVSCSESSKMIGIALDEAVFKSASALYYNVTPRILISALL | 308 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo14g00590 | 308 | SMART | bpi1-3 | 32 | 257 | IPR017942 | GO:0008289(InterPro) | |
| Chmo14g00590 | 308 | Gene3D | - | 41 | 221 | - | - | |
| Chmo14g00590 | 308 | PANTHER | OS06G0309200 PROTEIN | 9 | 297 | IPR045897 | - | |
| Chmo14g00590 | 308 | Pfam | LBP - BPI - CETP family, N-terminal domain | 36 | 210 | IPR017942 | GO:0008289(InterPro) | |
| Chmo14g00590 | 308 | SUPERFAMILY | Bactericidal permeability-increasing protein, BPI | 29 | 240 | IPR017943 | GO:0008289(InterPro) | |
| Chmo14g00590 | 308 | FunFam | phospholipid transfer protein-like | 35 | 215 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo14g00590 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 213596 | Chmo14g00590 | Chmo15g00452 | |
| 225881 | Chmo13g00612 | Chmo14g00590 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr14:25559977 | Chmo15g00452 | Chmo-Chr15:23433827 | dispersed | |
| Chmo | Chmo-Chr14:25559977 | Chmo13g00612 | Chmo-Chr13:27596035 | transposed |