AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo14g00607 | ATGGGTAAAATCTTAGCTATTCTTTTTTGCATCTTGTTAGCAAATCTATCAGTTTCGTACGGTCAAAACTGTAATAATTTTGCTTTTTCTCGTAACGCGTTATACACGACATGTGTCTCGTTACCAGTTTTAAACTCGCATCTTCATTGGAACTACAATACTAATGGTACAGTTGACATGGCATTTCGTCACACAGGGTCCACCACAAACCAATGGGTTGCATGGGCCTTAAATATTGGTGGGTCAGGTATGATTGGTGCACAAGCCCTTGTAGCAGTAACAAGCTCAAACGGGTCAGTTGATGCTTATACTAGTGCTGTAACAAGTTTTGGTACGACTTTACAAAGGAGCACTTTAAGCTTTGAAGTGCCAGTGATTAGAGCTGAGAGAGTTAATGGAGATGTGGTTATTTATGCAACGTTGGTCCCTCCACGTGGAGGGACGAGATTTAATCAAGTGTGGCAAGTGGGTCCGGTTAATAATGGAGCTCCGGGTATACATGCGTTGGTTAATGATAATAGGAACTCGGTTGGGTCGGTTGACTTTAGTACTGGTCAAACTGGTGCTGGTGGTAGTGTTGGTGGATCAAGGATGCGAAGGAGGAATACTCATGGAGTATTAAACGCTGTTAGTTGGGGAGTATTGATGCCTTTGGGAGCCATGACAGCAAGATATTTAAAGGTTTTTAAAGTAGCTAATCCAGCCTGGTTCTATATCCATGCTGCTTGCCAAACATCAGCCTATGGCGTAGGTGTAGCGGGATGGGCCACTGGACTCAAGCTAGGCAGTGACTCAGTCGGAATCACTCACACGAGTCATCGCAACATTGGAATCATCCTCTTTTCACTTGGAACACTTCAGGTTTTCGCTTTGCTGTTGAGGCCTAAGCCAGACAACAAGTACAGATTTTATTGGAACATATACCACCATGGCCTTGGATACTCGGTGATCATCTTGAGCATTATCAACGTCTACGAGGGACTTGATATCTTGGACCCTGAGAAGAAGTGGAAGCACGCCTACACCGGCATACTTATATCTTTGGGGGCTATCACGGTTCTGTTAGAAGCTTTGACATGGTTCATCGTTTTGAAGAGGAAGAAGGAAGACAAAAGGACACATGCAGGGACTAATGGTTCATATGGAGCCAATGGATCTGCGTAG | 1164 | 44.24 | MGKILAILFCILLANLSVSYGQNCNNFAFSRNALYTTCVSLPVLNSHLHWNYNTNGTVDMAFRHTGSTTNQWVAWALNIGGSGMIGAQALVAVTSSNGSVDAYTSAVTSFGTTLQRSTLSFEVPVIRAERVNGDVVIYATLVPPRGGTRFNQVWQVGPVNNGAPGIHALVNDNRNSVGSVDFSTGQTGAGGSVGGSRMRRRNTHGVLNAVSWGVLMPLGAMTARYLKVFKVANPAWFYIHAACQTSAYGVGVAGWATGLKLGSDSVGITHTSHRNIGIILFSLGTLQVFALLLRPKPDNKYRFYWNIYHHGLGYSVIILSIINVYEGLDILDPEKKWKHAYTGILISLGAITVLLEALTWFIVLKRKKEDKRTHAGTNGSYGANGSA | 387 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo14g00607 | 387 | CDD | DOMON-CIL1-like | 35 | 184 | IPR045265 | - | |
| Chmo14g00607 | 387 | Pfam | Protein of unknown function (DUF568) | 84 | 182 | IPR045265 | - | |
| Chmo14g00607 | 387 | ProSiteProfiles | DOMON domain profile. | 44 | 157 | IPR005018 | - | |
| Chmo14g00607 | 387 | FunFam | Cytochrome b561 and DOMON domain-containing protein | 182 | 372 | - | - | |
| Chmo14g00607 | 387 | CDD | Cyt-b561-FRRS1-like | 175 | 357 | - | - | |
| Chmo14g00607 | 387 | SMART | 561-7 | 203 | 328 | IPR006593 | - | |
| Chmo14g00607 | 387 | Pfam | Eukaryotic cytochrome b561 | 204 | 328 | IPR006593 | - | |
| Chmo14g00607 | 387 | Gene3D | - | 185 | 374 | - | - | |
| Chmo14g00607 | 387 | PIRSF | UCP037471 | 1 | 386 | IPR017214 | - | |
| Chmo14g00607 | 387 | PANTHER | CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN | 7 | 368 | - | - | |
| Chmo14g00607 | 387 | ProSiteProfiles | Cytochrome b561 domain profile. | 166 | 364 | IPR006593 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo14g00607 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr14:27254588 | Chmo1g03454 | Chmo-Chr1:218089970 | dispersed | |
| Chmo | Chmo-Chr3:176538688 | Chmo14g00607 | Chmo-Chr14:27254588 | dispersed | |
| Chmo | Chmo-Chr12:95392238 | Chmo14g00607 | Chmo-Chr14:27254588 | transposed | |
| Chmo | Chmo-Chr11:48919359 | Chmo14g00607 | Chmo-Chr14:27254588 | transposed | |
| Chmo | Chmo-Chr13:30203348 | Chmo14g00607 | Chmo-Chr14:27254588 | wgd | |
| Chmo | Chmo-Chr14:27254588 | Chmo15g00484 | Chmo-Chr15:25376897 | wgd | |
| Chmo | Chmo-Chr14:27254588 | Chmo22g04720 | Chmo-Chr22:288628059 | wgd | |
| Chmo | Chmo-Chr14:27254588 | Chmo23g04709 | Chmo-Chr23:282071063 | wgd | |
| Chmo | Chmo-Chr14:27254588 | Chmo24g04712 | Chmo-Chr24:286260413 | wgd |