Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chmo14g00671	ATGGCTGAAGCATATAAAATCTTCCAAACAACACTCATGCCATCACTCTCCCAAACACCATCCTTCCATAAACCATCTTTCCAAACACTCTCTTTACGTAGAACTTCATCACCAATCATAAGGTGCACTATTTCATCCACTAGTGACATATCCAAGGCTGCTGTGGGCTCGCAAGGGATACCGTGGGGTTGCGAGATTGATTCGGTCGAGAATGCTGCTGCGTTGGAGAAATGGTTGAGGGAATGTGGTTTGCCAGAGCAGAAAATGGATATAAAAAAGGTGGAAGTTGGTGAGAGAGGTTTGGTTGCGAATAATAATATTCGGAAGGGTGAGAAGTTGCTGTTTGTGCCTCCTTCGCTTGTTATTTCTGCGGATTCGGAGTGGAGTTTTCCAGAGGCTGGTGAAGTTTTGAAGAGATACGATGTACCCGATTGGCCATTGATTGCAACCTACCTAATTAGCGAGGCAAGTCTTATGAAGTCATCTAGATGGAGCAACTATATATCCGCGTTGCCAAGACAACCTTACTCACTTCTATACTGGACACGTGGAGAATTAGATAGGTACTTGGAAGCTTCCCAGATTAGAGAACGAGCAATTGAAAGGATCAATAATGTAACTGGGACGTACAATGACTTGAGGGCAAGGATATTTTCCAAGCATCCTAATCTGTTTCCTGAAGAGATATACAATATGGAAACGTTTAGATGGTCCTTCGGCATTCTTTTTTCACGCTTGGTTCGATTACCTTCTTTAGATGGAAGGGTTGCGTTGGTGCCATGGGCAGATATGTTAAATCATAGTTGTGATGTGGAAACCTTTTTGGATTACGATAAATCATCAAAGGGAGTTGTATTCACAACAGATCGCCCATACCAGCCAGGTGAGCAGGTTTTCATTTCATACGGAAGGAAATCTAATGGAGAACTACTGCTTTCTTACGGGTTTGTGCCAAGGCAAGGGACCAACCCACGTGACTCGGTTGAGTTGCCATTCTCACTTAAAAAATCAGATAAATGTTATGAACAAAAGGTGGAAGCTTTGAAGAATCATGGATTGTCAGCATCACAATGTTTTCCGTTACAAGTCACGGGTTGGCCATTGGAGCTGATGGCATATGCATATTTAGCCGTGAGTCCACCGAGTATGAGTGGAAAATTTGAGGAGATGGCTGCTGCAGCATCAAATAAAAACAACACTAATAAAGAGATCAGAATTCCTGAGCTAGAGGAACAAGCATTTCAATACATCTTGGATAGCTGTGAATCGAGTATATCAAAGTACACCAAGTTTCTACAGGCAAGTGGGTCAATGGATTTGGATATAACATCTCCAAAGCAGCTCAACCGTAAATTGTTCCTTAAACAGCTAGCAGTCGACTTGTGCAATAGTGAACAAAGAATCCTTTTTCGTACCCAATATATACTGAGAAGGAAATTGAGGGATATGAGAAGAGGTGAACTGAAGGCGTTAAATTTGTTTGATAGTGTCTCAAAGTTCTTTAAATGA	1509	41.88	MAEAYKIFQTTLMPSLSQTPSFHKPSFQTLSLRRTSSPIIRCTISSTSDISKAAVGSQGIPWGCEIDSVENAAALEKWLRECGLPEQKMDIKKVEVGERGLVANNNIRKGEKLLFVPPSLVISADSEWSFPEAGEVLKRYDVPDWPLIATYLISEASLMKSSRWSNYISALPRQPYSLLYWTRGELDRYLEASQIRERAIERINNVTGTYNDLRARIFSKHPNLFPEEIYNMETFRWSFGILFSRLVRLPSLDGRVALVPWADMLNHSCDVETFLDYDKSSKGVVFTTDRPYQPGEQVFISYGRKSNGELLLSYGFVPRQGTNPRDSVELPFSLKKSDKCYEQKVEALKNHGLSASQCFPLQVTGWPLELMAYAYLAVSPPSMSGKFEEMAAAASNKNNTNKEIRIPELEEQAFQYILDSCESSISKYTKFLQASGSMDLDITSPKQLNRKLFLKQLAVDLCNSEQRILFRTQYILRRKLRDMRRGELKALNLFDSVSKFFK	502

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chmo14g00671	502	PIRSF	RMT-SET	1	499	IPR011192	GO:0009507(InterPro)\|GO:0030785(InterPro)
	Chmo14g00671	502	SUPERFAMILY	SET domain	72	319	IPR046341	-
	Chmo14g00671	502	ProSiteProfiles	SET domain profile.	87	303	IPR001214	GO:0005515(InterPro)
	Chmo14g00671	502	SUPERFAMILY	RuBisCo LSMT C-terminal, substrate-binding domain	333	501	IPR036464	-
	Chmo14g00671	502	CDD	SET-RBCMT	82	317	IPR044431	GO:0016279(InterPro)\|GO:0018022(InterPro)
	Chmo14g00671	502	PANTHER	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	73	478	IPR050600	GO:0016279(PANTHER)\|GO:0018026(PANTHER)
	Chmo14g00671	502	FunFam	Ribulose-1,5 bisphosphate carboxylase-oxygenase large subunit N-methyltransferase, chloroplastic	56	316	-	-
	Chmo14g00671	502	FunFam	Rubisco methyltransferase family protein	322	485	-	-
	Chmo14g00671	502	Pfam	SET domain	99	303	IPR001214	GO:0005515(InterPro)
	Chmo14g00671	502	Gene3D	-	321	491	IPR036464	-
	Chmo14g00671	502	Gene3D	set domain protein methyltransferase, domain 1	69	317	-	-
	Chmo14g00671	502	Coils	Coil	196	216	-	-
	Chmo14g00671	502	SMART	set-7	87	309	IPR001214	GO:0005515(InterPro)
	Chmo14g00671	502	Pfam	Rubisco LSMT substrate-binding	336	469	IPR015353	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chmo14g00671	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	213626	Chmo14g00671	Chmo15g00542
	225899	Chmo13g00682	Chmo14g00671

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chmo	Chmo-Chr14:30050359	Chmo15g02472	Chmo-Chr15:168308043	dispersed
	Chmo	Chmo-Chr13:31943989	Chmo14g00671	Chmo-Chr14:30050359	wgd
	Chmo	Chmo-Chr14:30050359	Chmo15g00542	Chmo-Chr15:28353714	wgd

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Chmo	SET	1.4e-11	CL0489		TR	SET