AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo14g00685 ATGTGTACCTACTTGAAGAACATGGATAATTGGAAGCCAGCTCAGCTGAAGAACATGAGTTTTGAAAAAGTCAAAGAGTTATTTGATAAAGCTTTCAAGAAGGTAAACACTTTTGTTCCTATGGAAACAGAGCAGATGATGGAAACAGAAAAGGTAGTTGAGGGTTCTAAGAGAGCAGGAGATGAGTTAGAGCATGAAGTAACAAAGAAAAAGAAACTTGATGAGCAAAAAGAGCAAAAGCAAAGAGAATTGGATGAAAAGGACAGAGCTAAAAATCAAAAGATAATAGTGATTGCTTTTGATGTTGAGGAGGAAATAGTTGATGTTGTTCCTTTGAAGGTTAAAGCACCTGTTATTGGCTGGAAAACTGGGCACCATGGAAAGACATGCTGGTGGGAAATAGTGAGAGCTGGTGGACAGACTCAGAGATTTAGCACTTTTGGATTGATGCTCAGGAGCTTTGATAGGGAAGATTTGGAGACTCTATGGGAGCTGGTAAAAGCTAAGTATGGATATACCAGGCCAAATGATACCTTGGATAGGGTTCTTTGGGGAGACTTGAAAGTGATGTTTGAACCTTATCATGAAGATAGCGCTTGGAGGGAACAATACAAGAATACATTTTTGCAATGGAAGTTAAAAATACCAAGAATGCACAAAACAGCACAATCATGGTTCACAGGAGGCCCAAGCCAATCAAACAGCGATCTTAATAAGAAACCACCTTCACTTCTTGCTGACTGGAACGCATATGCTGCATCATCTTCAGATGCTGATAGTCAAGATCTTGATTTAGGGTTTGATATTGAATCTGCTGTTAGGACTAAGGTTTCCGGTACTTTCAATGTAGTTTCAAAGGGAGTGAGGGACATACCTGGTAGTTTGCAGTCAGCAACAAGCAATGTCTCAACTGGAAAGTCTTTCATGACGTTCGGTATACTTCTTGCTGTTGGGGTGTTCCTAGTCTTTATTGCGGTCACTGTATTTCTACCAGTCATGGTGTTTGCGCCTCAGAAGTTTGCTATATGTTTCACAATTGGTTGTGCCCTCATAATTGCTTCATTTTTTGCTCTAAAAGGTTATAGAACTCAGTTTGCACACATGACATCTAGAGAGGTAATCAAACGGTTTCATAATTCACTTCTTATTGTGCTGTATACCGAACTTACGTGCTTCTTATGTTTTCAGAGACTTCCTATTACATTGGGCTTTATTGGCAGCATGCTCGGTACCATTTATGTATCAATGGTCCTTCACAGTTATGTTCTTTCCGTGTTTTTCTCAATTTTACAGGTTGTTTCATTGTCATACTACGCAATTTCATACTTTCCTGGAGGATCGGCTGGTGTGAAGTTCTTCACTTCTGCTCTTACTTCTTCGATCATGGGTTGCTTTGGGAGGTGA 1404 39.89 MCTYLKNMDNWKPAQLKNMSFEKVKELFDKAFKKVNTFVPMETEQMMETEKVVEGSKRAGDELEHEVTKKKKLDEQKEQKQRELDEKDRAKNQKIIVIAFDVEEEIVDVVPLKVKAPVIGWKTGHHGKTCWWEIVRAGGQTQRFSTFGLMLRSFDREDLETLWELVKAKYGYTRPNDTLDRVLWGDLKVMFEPYHEDSAWREQYKNTFLQWKLKIPRMHKTAQSWFTGGPSQSNSDLNKKPPSLLADWNAYAASSSDADSQDLDLGFDIESAVRTKVSGTFNVVSKGVRDIPGSLQSATSNVSTGKSFMTFGILLAVGVFLVFIAVTVFLPVMVFAPQKFAICFTIGCALIIASFFALKGYRTQFAHMTSREVIKRFHNSLLIVLYTELTCFLCFQRLPITLGFIGSMLGTIYVSMVLHSYVLSVFFSILQVVSLSYYAISYFPGGSAGVKFFTSALTSSIMGCFGR 467
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chmo14g00685 467 MobiDBLite consensus disorder prediction 52 86 - -
Chmo14g00685 467 Coils Coil 63 93 - -
Chmo14g00685 467 PANTHER UNCHARACTERIZED 396 459 IPR011691 GO:0016020(InterPro)|GO:0016192(InterPro)
Chmo14g00685 467 Pfam Got1-Sft2-like family 309 375 IPR007305 GO:0016192(InterPro)
Chmo14g00685 467 Pfam Got1-Sft2-like family 385 444 IPR007305 GO:0016192(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo14g00685 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
213633 Chmo14g00685 Chmo15g00564
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chmo Chmo-Chr14:31253219 Chmo1g01354 Chmo-Chr1:68188944 dispersed
Chmo Chmo-Chr14:31253219 Chmo15g00564 Chmo-Chr15:30097667 wgd