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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo14g00693 ATGGCAAAGCAAAAGATTGTTGTGAAGGTGACGATGATGAACAATGACAAGAAATCTCGTAAGGCTCTGAAGATTGCCGTTGGTCTATGTGGAGTCGAATCAGCATCTTTGGTTGGATCAGACCAGATAACAGTGACGGGAGAAGGTATTGACTCGGTGAAATTGACGACTTTGCTAAGGAAAGGTGTAGGATACACAGAGTTAGTGAGTGTTGGTAACGTGGAAGAGAAGAAACCCGAAACCAAGCCAACCGAGGTGACATGGCAAATTAATCCTTACGACTATTACAATTATTGGTATGGAATGCCACGATATTATGGTTATTAA 327 41.9 MAKQKIVVKVTMMNNDKKSRKALKIAVGLCGVESASLVGSDQITVTGEGIDSVKLTTLLRKGVGYTELVSVGNVEEKKPETKPTEVTWQINPYDYYNYWYGMPRYYGY 108
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chmo14g00693 108 Gene3D - 1 77 - -
Chmo14g00693 108 PANTHER OS04G0464100 PROTEIN 4 85 IPR044296 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo14g00693 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
213635 Chmo14g00693 Chmo15g00569
225907 Chmo13g00700 Chmo14g00693
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chmo Chmo-Chr14:31721405 Chmo15g00568 Chmo-Chr15:30258644 dispersed
Chmo Chmo-Chr14:31690115 Chmo14g00693 Chmo-Chr14:31721405 tandem
Chmo Chmo-Chr14:31721405 Chmo14g00694 Chmo-Chr14:31752296 tandem