Gene detail

AGRP Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chmo14g00718	ATGAGAGAAGAAGGCATGAGCTCGAATGGGGACCCACTTCTTTTCCCCAATTCACCTCCTCCCACTGCTGCTGCCAGCTCTGCTGGGGCATCATCACCAGCTTTTGCCACCAATGCTGGCAGTGCAGATTGGTTGGGTCATGGACAGGGATCTAAAGCAGGTTCTCTATCTCGGATTAGTTCACAGCCAATGTGGATTTCGTTGAGCACAAGTGCTTGTGGTTCAGCTCTTGGCTCGTCCCAACCTTCATGTAGACCATGGGAAAGGGGTGACCTTCTTAGACGACTGTCCACATTCAGGCCTGCAAATTGGTTTGGAAAGCCTAAGGCTGCTAGCTCACTTGCCTGTGCTAGAAGAGGGTGGGTGAATGTGGATGTTGATAAGATTCAGTGTGAGTCTTGTGGTGCAAACCTGAAATACAATGCACCGGATTCACATGCTCATACGGAAGGTGAAAATGGTGAAGAATTTGCCAATCAGCTCGATGAAGGACACAATGTCACATGTCCATGGAGAGGAAACAGCTGTGCAGAAAGTTTAGTGCAGTTCCCACCTACTCCTCCATCAGCCCTTATCGGGGGTTACAAGGACCGTTGTGATGGACTCCTTCAGTTTCCGTATCTACCTGTTGTGGCTGCTTCTGCCATTGAGCAGATGAAGCTTTCTAGAGGTCCAGAAATTCGACCGCTTTCTGGTCCAGCCCAGAAGTTAATAAGCCTTTGTGGATGGGAGCCGAGGTGGCTTTCAAATGTTCAAGACTGTGAAGAACATTCTGCTCAATCTGCTAGGAATGGGGCTTCTTTCAGTCCAATTAAAGATGACAGAAATCGTAACAAGAAACTTATGTCTGCTTCAACCAAAAAAATTCCTCGGGCCCCATCAAAGTTTGAATCTAGATCACCACTGTTGGATTGCAGCTTATGTGGCGCCACAGTGAGAATCTTGGATTTTATTCGAGTTAATCGTCCAGCTCGTTTTGCTCCTAACAACAGCGATGTTCCTGAAACAAGTAAAAAGATGGCACTTACTCGTGGGGTAAGTGCTGCTAGTGGAATTAGTGGGTGGGTGGCAGATGGTGGTGGGGAGAAAGAGCAAACAGAAGACATTGATGAAGCTGCAACCACCGGAGACTGGGAAGTCGATGTCGAATATTAG	1155	47.79	MREEGMSSNGDPLLFPNSPPPTAAASSAGASSPAFATNAGSADWLGHGQGSKAGSLSRISSQPMWISLSTSACGSALGSSQPSCRPWERGDLLRRLSTFRPANWFGKPKAASSLACARRGWVNVDVDKIQCESCGANLKYNAPDSHAHTEGENGEEFANQLDEGHNVTCPWRGNSCAESLVQFPPTPPSALIGGYKDRCDGLLQFPYLPVVAASAIEQMKLSRGPEIRPLSGPAQKLISLCGWEPRWLSNVQDCEEHSAQSARNGASFSPIKDDRNRNKKLMSASTKKIPRAPSKFESRSPLLDCSLCGATVRILDFIRVNRPARFAPNNSDVPETSKKMALTRGVSAASGISGWVADGGGEKEQTEDIDEAATTGDWEVDVEY	384

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chmo14g00718	384	PANTHER	NUCLEAR-INTERACTING PARTNER OF ALK	1	376	-	GO:0005634(PANTHER)
	Chmo14g00718	384	MobiDBLite	consensus disorder prediction	1	34	-	-
	Chmo14g00718	384	MobiDBLite	consensus disorder prediction	259	290	-	-
	Chmo14g00718	384	Pfam	C3HC zinc finger-like	86	205	IPR012935	GO:0008270(InterPro)
	Chmo14g00718	384	MobiDBLite	consensus disorder prediction	20	34	-	-
	Chmo14g00718	384	MobiDBLite	consensus disorder prediction	353	384	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chmo14g00718	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	48048	Chmo14g00718	Chmo23g04804
	48049	Chmo14g00718	Chmo24g04814
	213644	Chmo14g00718	Chmo15g00602
	225915	Chmo13g00729	Chmo14g00718

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chmo	Chmo-Chr14:32871652	Chmo22g04849	Chmo-Chr22:293352544	dispersed
	Chmo	Chmo-Chr14:32871652	Chmo15g00602	Chmo-Chr15:31878175	wgd