AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo14g00857 | ATGGAACCCCAAGAAAACCACCACCCATCTCCAGCCAACTCACCATCATCCAACTGCAGCACCACCATACAAACACCACCATTAACACCACGACCCATCCAAAGATCCGACCCAAATCCATACCCTACCACCTTTGTTCAAGCTGACACTTCTTCATTCAAACAAGTTGTCCAAATGCTAACTGGATCATCCCAACAAGATTCATCATCAAATGGGTCAAACGGGTCAAATGGGTCCAACCCTTCAAAGGTATCAATCCCACCTGTGAAAAAACAAAGCTTCAAGCTATATGAACGTAGGAACAGTTTGAACTTAAAGAACGGGTTGATGATAAACCCAATGGGTCCAAGATTCGGGTCAAGTTCATCATCTCCAAGGGTTCAAGAGCTTTTGTCACCAAGTATACTTGATTTTCCATCCCTGGTGTTGAGTCCAGTTACACCATTAGTTGAAGATCCATTTGATAAAAAAGAAGAAGAAAGGGTTATTAAGGAAAAAGGGTTTTATTTACATCCGTCACCCAGAGCAGTGGCAAAAGCACGTGGCTCTGCTGCAGAGCCACGCTTGTTGCCACTTTTCCCGTTGACGTCCCCGAGATCATCGTTGAGTTAG | 612 | 44.44 | MEPQENHHPSPANSPSSNCSTTIQTPPLTPRPIQRSDPNPYPTTFVQADTSSFKQVVQMLTGSSQQDSSSNGSNGSNGSNPSKVSIPPVKKQSFKLYERRNSLNLKNGLMINPMGPRFGSSSSSPRVQELLSPSILDFPSLVLSPVTPLVEDPFDKKEEERVIKEKGFYLHPSPRAVAKARGSAAEPRLLPLFPLTSPRSSLS | 203 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo14g00857 | 203 | Pfam | VQ motif | 40 | 66 | IPR008889 | - | |
| Chmo14g00857 | 203 | PANTHER | VQ MOTIF-CONTAINING PROTEIN 11-LIKE | 18 | 201 | IPR039611 | - | |
| Chmo14g00857 | 203 | MobiDBLite | consensus disorder prediction | 1 | 91 | - | - | |
| Chmo14g00857 | 203 | MobiDBLite | consensus disorder prediction | 38 | 87 | - | - | |
| Chmo14g00857 | 203 | MobiDBLite | consensus disorder prediction | 7 | 30 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo14g00857 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 48075 | Chmo14g00857 | Chmo22g05007 | |
| 48076 | Chmo14g00857 | Chmo23g04975 | |
| 48077 | Chmo14g00857 | Chmo24g05066 | |
| 213666 | Chmo14g00857 | Chmo15g00774 | |
| 216433 | Chmo13g00873 | Chmo14g00857 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr13:317677471 | Chmo14g00857 | Chmo-Chr14:41588120 | dispersed | |
| Chmo | Chmo-Chr14:41588120 | Chmo24g05066 | Chmo-Chr24:297807086 | dispersed | |
| Chmo | Chmo-Chr13:45554703 | Chmo14g00857 | Chmo-Chr14:41588120 | wgd | |
| Chmo | Chmo-Chr14:41588120 | Chmo15g00774 | Chmo-Chr15:44463436 | wgd | |
| Chmo | Chmo-Chr14:41588120 | Chmo22g05007 | Chmo-Chr22:298691302 | wgd | |
| Chmo | Chmo-Chr14:41588120 | Chmo23g04975 | Chmo-Chr23:291540197 | wgd |