Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo14g00940 | ATGGCATCAATGACAACAGCTTTCACCTCACCACTCTACACCAAAACCCAATCATCCTTCCATGGAGTCCCAGTCACATCACCTGTTAGAATGATCCAACCAGTCAGATCATCCAACAAAACAAACACACCCATTACCATGTCGTATGATCTTGGATCATTCACGTTCCAACCCATTAAGGAAGCTATTGTGTCACGTGAGATGACTAGGAGGTACATGACTGACATGATTACTTATGCTGATACTGATGTTGTTGTTGTTGGTGCTGGATCTGCTGGTTTGTCTTGTGCTTATGAGCTTAGCAAAAACCCTAACGTTCAGGTAGCTATCATTGAGCAATCCGTGAGCCCAGGTGGTGGTGCATGGCTAGGTGGACAACTATTCTCAGCAATGGTTGTCCGCAAGCCTGCCCACCACTTCCTTGACGAGCTCGAGATCGAGTACGACGAGCAAGAAGACTACGTTGTCATCAAACACGCCGCTTTGTTCACATCCACAATCATGAGCAAGCTTTTGGCTAGGCCAAATGTCAAGCTCTTTAACGCGGTTGCAGCTGAGGACTTGATCATCAAGGGAGGAAGAGTAGGTGGTGTTGTGACCAACTGGTCTTTGGTCGCACAGAACCACGACACACAATCATGCATGGACCCTAATGTTATGGAGGCTAAGGTGGTTGTCAGCTCATGTGGCCATGATGGGCCCATGGGCGCTACTGGTGTTAAGAGGCTTAGGAGTGTTGGCATGATCGAGAGCGTTCCTGGGATGAAGGCTCTCGACATGAACACTGCTGAAGATGCAATTGTGAAGCTGACTAGAGAGATTGTTCCTGGTATGATTGTTACCGGGATGGAAGTTGCTGAGATCGATGGATCTCCCAGGATGGGGCCAACTTTTGGTGCTATGATGATCTCAGGACAGAAGGCTGCTCATTTGGCCTTGAAGGCGTTGGGTCTTCCTAACGCGTTGGATGGAACATTGGTGGGAAGCCTCCACCCAGAGCTTATCCTGGCTGCTGCCGACTCTAGCGAGACTGTTGATGCCTAA | 1044 | 48.95 | MASMTTAFTSPLYTKTQSSFHGVPVTSPVRMIQPVRSSNKTNTPITMSYDLGSFTFQPIKEAIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHHFLDELEIEYDEQEDYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIIKGGRVGGVVTNWSLVAQNHDTQSCMDPNVMEAKVVVSSCGHDGPMGATGVKRLRSVGMIESVPGMKALDMNTAEDAIVKLTREIVPGMIVTGMEVAEIDGSPRMGPTFGAMMISGQKAAHLALKALGLPNALDGTLVGSLHPELILAAADSSETVDA | 347 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo14g00940 | 347 | NCBIfam | sulfide-dependent adenosine diphosphate thiazole synthase | 61 | 316 | IPR002922 | - | |
| Chmo14g00940 | 347 | FunFam | Thiamine thiazole synthase, chloroplastic | 81 | 316 | - | - | |
| Chmo14g00940 | 347 | Hamap | Thiamine thiazole synthase, chloroplastic [THI4]. | 2 | 325 | IPR027495 | GO:0009228(InterPro) | |
| Chmo14g00940 | 347 | PANTHER | THIAMINE THIAZOLE SYNTHASE | 11 | 346 | - | - | |
| Chmo14g00940 | 347 | Gene3D | - | 50 | 80 | - | - | |
| Chmo14g00940 | 347 | SUPERFAMILY | FAD-NAD(P)-binding domain | 44 | 309 | IPR036188 | - | |
| Chmo14g00940 | 347 | Gene3D | - | 81 | 316 | IPR036188 | - | |
| Chmo14g00940 | 347 | Pfam | Thi4 family | 65 | 298 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo14g00940 | K03146 | cysteine-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.60] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 48101 | Chmo14g00940 | Chmo16g01018 | |
| 48102 | Chmo14g00940 | Chmo17g00929 | |
| 48103 | Chmo14g00940 | Chmo18g01004 | |
| 216470 | Chmo13g01000 | Chmo14g00940 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1433133 | Chmo | Chmo15g00872 | Chmo-Chr15:50156075 | Chmo14g00940 | Chmo-Chr14:46752065 | |
| 1493249 | Chmo | Chmo13g01000 | Chmo-Chr13:52311635 | Chmo14g00940 | Chmo-Chr14:46752065 | |
| 1501076 | Chmo | Chmo14g00940 | Chmo-Chr14:46752065 | Chmo16g01018 | Chmo-Chr16:43571731 | |
| 1501123 | Chmo | Chmo14g00940 | Chmo-Chr14:46752065 | Chmo17g00929 | Chmo-Chr17:39114250 | |
| 1501175 | Chmo | Chmo14g00940 | Chmo-Chr14:46752065 | Chmo18g01004 | Chmo-Chr18:43150776 |