AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo14g00973 | ATGAAACCCAAACATTCATCATCCTCGTCCTTCATTTCCAAAACCCTTATAATAATAACACTAATCATCACCTTTATATACACTGCAAATATTCCAAAAGTAGAAGGTTTTAAAGCACCAGTTGACCCACAAGACATACTCCCACTTTTGCCGAGACAAATTTCATGGCCTATTCTGAATAAGCTTCGAAGCGCTGCAGATTTGCTTCCGAGCTTCGTTGGCTCCGCTTCGATAGCGAATAATTCGGGTCTGAGTTGGAAAGGGTCTTGTTTTTATCAAAATAGTGCTTGGTTGGAACTTCATAATAAAACTGGGAGTCAGTTTGGTGGTGGCACTCTTCATATTAAGGTAAGCAATGCACACAGTTGGACATGTATGGATATTTATGTCTTTGCTACTCCATATCGTGTGACATGGGACTATTATTTTATATCCCGTGAGCATACGCTTGAGTTCGATGAGTGGTCTGAGAAAGCTGAGTATGAATACGTAAAACGTAAGGGAGTTGCCATTTTCCTAATGCAAGCAGGGATGATAGGGACCCTAGAAGCATTGTGGGAGGTATTCCCCCTGTTTTCAAACACCGGATGGGGCGAGAATTCTAATCTTGCTTTTCTTACAAAACATATGGGAGCTAACTTTGAAGCACGTCCTGAGCCGTGGGTTACAAATATTACTGTTGATGATATACATTCGGGAGACTTTCTTGCAATATCAAAAATTCGTGGTAGATGGGGTGGGTTCGAGACTCTCGAGAAATGGGTATCTGGGGCATATGCTGGTCATTCCGCTGTTTGCTTGAGGGATCCTCAAGGAAAACTATGGGTTGGGGAATCGGGGCATGAAGATGAAGAGGGTCAAGATGTTATTGCTCTGTTGCCTTGGGATGAGTGGTGGAACTTTGAGTTAACAGAAGATGATTCTAATCCTCATATTGCTCTACTTCCTTTGCATCCTGACCTTCGAGCTAAATTTAACGAGACCGCTGCATGGGAGTATGCCCAAAGCATGATTGGCTTACCATACGGTTATCACAATTTGATATTTAGCTGGATAGACACTATCAGTGATAATTTCCCTCCACCATTGGATGCTAATCTGGTTGCATCTGTTATGACCGTGTGGAATCAAATGCAGCCTGCATATGCTGCTAACATGTGGAATGAAGCCTTGAATAAGCGGCTTGGTACTAAGGGGCTCGAGCTTCCTGATATTTTAGTCGAAGTTGAAAGACGTGGTTCATCTTTTGCTGAACTATTGACCATACCTGAACAGGATGACTGGATATACGCCGACGGAAAGTCAACTTCTTGTGTTGCTTTCGTCCTAGAAATGTACAAGGAAGCAGGACTATTTGGAGATCTCTCTGACGAAATTCAAGTTACTGAATTCACTATAAAGGACGCTTACACGCTTAACTTCTATGAAAACAATTCGAGTCGTCTGCCAAAGTGGTGTAATGAAGGAGACACTGTTGAGCTTCCATTTTGTCAAATCAAAGGAAAGTATCGAATGGAACTACCTGGATACAATACCATTGAACCGTATCCTCATATGACCGAACATTGCCCGTCACTGCCCCCTGACTATTCAAGGCCTGATTACTGCTGA | 1611 | 42.58 | MKPKHSSSSSFISKTLIIITLIITFIYTANIPKVEGFKAPVDPQDILPLLPRQISWPILNKLRSAADLLPSFVGSASIANNSGLSWKGSCFYQNSAWLELHNKTGSQFGGGTLHIKVSNAHSWTCMDIYVFATPYRVTWDYYFISREHTLEFDEWSEKAEYEYVKRKGVAIFLMQAGMIGTLEALWEVFPLFSNTGWGENSNLAFLTKHMGANFEARPEPWVTNITVDDIHSGDFLAISKIRGRWGGFETLEKWVSGAYAGHSAVCLRDPQGKLWVGESGHEDEEGQDVIALLPWDEWWNFELTEDDSNPHIALLPLHPDLRAKFNETAAWEYAQSMIGLPYGYHNLIFSWIDTISDNFPPPLDANLVASVMTVWNQMQPAYAANMWNEALNKRLGTKGLELPDILVEVERRGSSFAELLTIPEQDDWIYADGKSTSCVAFVLEMYKEAGLFGDLSDEIQVTEFTIKDAYTLNFYENNSSRLPKWCNEGDTVELPFCQIKGKYRMELPGYNTIEPYPHMTEHCPSLPPDYSRPDYC | 536 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo14g00973 | 536 | PANTHER | OS01G0793500 PROTEIN | 15 | 536 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo14g00973 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1291107 | Chmo | Chmo10g04010 | Chmo-Chr10:271465558 | Chmo14g00973 | Chmo-Chr14:48433484 | |
| 1295441 | Chmo | Chmo11g04023 | Chmo-Chr11:251220580 | Chmo14g00973 | Chmo-Chr14:48433484 | |
| 1305799 | Chmo | Chmo14g00973 | Chmo-Chr14:48433484 | Chmo7g00579 | Chmo-Chr7:28614883 | |
| 1463396 | Chmo | Chmo26g00818 | Chmo-Chr26:73644016 | Chmo14g00973 | Chmo-Chr14:48433484 | |
| 1493270 | Chmo | Chmo13g01035 | Chmo-Chr13:53862544 | Chmo14g00973 | Chmo-Chr14:48433484 | |
| 1500080 | Chmo | Chmo14g00973 | Chmo-Chr14:48433484 | Chmo15g00905 | Chmo-Chr15:52488309 | |
| 1501085 | Chmo | Chmo14g00973 | Chmo-Chr14:48433484 | Chmo16g00988 | Chmo-Chr16:41795150 | |
| 1501126 | Chmo | Chmo14g00973 | Chmo-Chr14:48433484 | Chmo17g00910 | Chmo-Chr17:38123906 | |
| 1501179 | Chmo | Chmo14g00973 | Chmo-Chr14:48433484 | Chmo18g00974 | Chmo-Chr18:41660406 |