Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo14g01030 | ATGAGTAGTAATCCAGCTACTCCGATGAACGCGAACGCCCCCTCCTCAAGTGGATCTCCCGATCCAAACACTCCCAGGCGTAACTCTAAGCGACCTAAATATTCTAGGTTTACACAGCAGGAGCTTCCAGCTTGCAAACCGATTCTTACCCCCAAATGGGTGATATCAGCATTCATGCTTGTGACAATTGTCTTCATCCCAATAGGACTTGTTTCCCTATTCGCTTCTCGTGATGTTGTTGAGATTATTGACCGGTACGATAACGCCTGCCTAACAGGCTCAAAAAGTCAAAAGGTCCAAGCTATACAATCTGAAACTACCAATAAAACCTGTGTCAGAAGCTTAACAGTCACAAAGAAAATGAAGCAGCCTATCTACATCTATTATCAGCTTGATAACTTCTATCAGAATCATCGCAGGTACGTCAAGAGCCGAAGTGACACTCAGTTGAGAAACCGAGGTGACGAGAACGACACAAGTGCATGCAATCCTGAACATGAAGCAAATGGAATGCCGATTGTGCCCTGTGGTCTTGTAGCATGGAGTTTGTTTAATGACACTTATAGGTTCTCCACAAGTAACAGCCGAGAATTGCGTGTAAACAAGAGGCATATTTCATGGAAGAGTGACAGGGATGACAAGTTTGGCAGTGACGTCTTCCCGAATAATTTCCAGAATGGAACTCTTATTGGTGGTGGACGTCTCAATGAGTCTATACCTTTAAGTGAGCAAGAAGACCTAATCGTGTGGATGCGAACTGCGGCTCTTCCAACTTTTAGGAAGTTGTATGGGAAGATAGAAGAAGATATTGAGGCAGGCGAGACAATAAACGTGGTATTAGAGAACAGATACAACACATATAGTTTCAGTGGCAAGAAGAAACTCGTGCTTTCGACAACCAGCTGGCTTGGTGGAAAGAATAACTTTATTGGCATTGCATATCTTGCTGTTGGTGGCTTGTGCTTCCTACTAGCAACAACTTTCACCATCATATATTTGTTTAAGCCAAGGCATCTTGGAGATCCTAGTTATTTGTCATGGAACCGGAACCCAGGTGGTCACTGA | 1065 | 43.76 | MSSNPATPMNANAPSSSGSPDPNTPRRNSKRPKYSRFTQQELPACKPILTPKWVISAFMLVTIVFIPIGLVSLFASRDVVEIIDRYDNACLTGSKSQKVQAIQSETTNKTCVRSLTVTKKMKQPIYIYYQLDNFYQNHRRYVKSRSDTQLRNRGDENDTSACNPEHEANGMPIVPCGLVAWSLFNDTYRFSTSNSRELRVNKRHISWKSDRDDKFGSDVFPNNFQNGTLIGGGRLNESIPLSEQEDLIVWMRTAALPTFRKLYGKIEEDIEAGETINVVLENRYNTYSFSGKKKLVLSTTSWLGGKNNFIGIAYLAVGGLCFLLATTFTIIYLFKPRHLGDPSYLSWNRNPGGH | 354 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo14g01030 | 354 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
| Chmo14g01030 | 354 | MobiDBLite | consensus disorder prediction | 145 | 162 | - | - | |
| Chmo14g01030 | 354 | PANTHER | CELL CYCLE CONTROL PROTEIN 50 | 26 | 346 | IPR005045 | GO:0005783(PANTHER)|GO:0005794(PANTHER)|GO:0005886(PANTHER)|GO:0016020(InterPro) | |
| Chmo14g01030 | 354 | Pfam | LEM3 (ligand-effect modulator 3) family - CDC50 family | 73 | 337 | IPR005045 | GO:0016020(InterPro) | |
| Chmo14g01030 | 354 | PIRSF | Lem3-Cdc50 | 4 | 350 | IPR005045 | GO:0016020(InterPro) | |
| Chmo14g01030 | 354 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Chmo14g01030 | 354 | MobiDBLite | consensus disorder prediction | 145 | 166 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo14g01030 | K26935 | cell cycle control protein 50 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 48131 | Chmo14g01030 | Chmo22g05647 | |
| 48132 | Chmo14g01030 | Chmo24g05760 | |
| 48133 | Chmo14g01030 | Chmo24g05784 | |
| 213739 | Chmo14g01030 | Chmo15g00976 | |
| 216509 | Chmo13g01110 | Chmo14g01030 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr14:51814509 | Chmo24g05784 | Chmo-Chr24:328179524 | dispersed | |
| Chmo | Chmo-Chr13:57154521 | Chmo14g01030 | Chmo-Chr14:51814509 | wgd | |
| Chmo | Chmo-Chr14:51814509 | Chmo15g00976 | Chmo-Chr15:56780925 | wgd | |
| Chmo | Chmo-Chr14:51814509 | Chmo22g05647 | Chmo-Chr22:323455868 | wgd | |
| Chmo | Chmo-Chr14:51814509 | Chmo24g05760 | Chmo-Chr24:326743964 | wgd |