Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo14g01114 | ATGAATCTCACAAGCTTAGTTCGAACCTCATATATCACAAGAACACTCACTAACTCCATTAAACCAATATCTTCATCTCCCTCAATTTCACACACACCCACTTCCTTAAACCCTAAACCCAAAACCCCATTATACCTTAAACCCCCAATATACACCACATCTTTATCATCCCTCAAAAACTTCCAAAAATGGGCCAAAACCAAAACCCTTTCTTCATCATTCCAAGACTCATCAAATTTGCACCAAGAACTCAACTGGTTACTCCAAGATTCCTTACAAAACCCAAATATACTCCATACCCATGAAGAAAATAACAATCTTGTTGCATTAAGATTAAAGCTAGATGATTTGTATGACTTATGGACTCAAAGAATTGAGAAAAGAAGACCTTTTCAGTATATAGTTGGTTGTGAGCATTGGAGGGATTTGATATTGAGTGTTGAAGAAGGGGTTTTGATTCCAAGGCCTGAAACTGAGTTGATTGTGGATTTGGTTAATGATGTGATTAAGGGTGGTGAAAATGGTTATTTGGGGAATGGGTTGTGGGTGGATTTGGGGACTGGGAGTGGCGCTATTGCGATTGGGATTGGGAGGGTTTTAGGGGATTTGGGGAGAGTTGTTGGTGTTGATTTGAGTGACGTTGCGGTGAGAGTTGCGTTGTATAATGTGGAGAAGTATAATTTGCAGGATAAGATTTCTATAAAGCAAGGGTCATGGTTTGAACCGTTGAGTGAGTTCAAAGGACAGGTTGCAGGCCTTGTAAGCAATCCACCATACATACCAAGCGGACACATTGATGGACTCCAACCCGAAGTTGGTAGACATGAACCAATACTGGCATTAGATGGTGGTGATGATGGCATGTCTGACCTTCTTCATATTTGCAATGGTGCTGCTTCGATGCTAAAATCTGGCGGATATTTTGCTTTTGAGACGAACGGTGAAGATCATTGCAGATTTCTGGTGGACCATATGGAAACCATTCACAAAGAAAGCTTCTGTAATCTCAAGATTGTACCAGATTTTGCTGGCATCCAACGTTTTGTAACTGGATTCAGATCATAA | 1065 | 40.56 | MNLTSLVRTSYITRTLTNSIKPISSSPSISHTPTSLNPKPKTPLYLKPPIYTTSLSSLKNFQKWAKTKTLSSSFQDSSNLHQELNWLLQDSLQNPNILHTHEENNNLVALRLKLDDLYDLWTQRIEKRRPFQYIVGCEHWRDLILSVEEGVLIPRPETELIVDLVNDVIKGGENGYLGNGLWVDLGTGSGAIAIGIGRVLGDLGRVVGVDLSDVAVRVALYNVEKYNLQDKISIKQGSWFEPLSEFKGQVAGLVSNPPYIPSGHIDGLQPEVGRHEPILALDGGDDGMSDLLHICNGAASMLKSGGYFAFETNGEDHCRFLVDHMETIHKESFCNLKIVPDFAGIQRFVTGFRS | 354 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo14g01114 | 354 | CDD | AdoMet-MTases | 183 | 264 | - | - | |
| Chmo14g01114 | 354 | ProSitePatterns | N-6 Adenine-specific DNA methylases signature. | 253 | 259 | IPR002052 | GO:0003676(InterPro)|GO:0008168(InterPro)|GO:0032259(InterPro) | |
| Chmo14g01114 | 354 | Pfam | Ribosomal protein L11 methyltransferase (PrmA) | 182 | 236 | - | - | |
| Chmo14g01114 | 354 | NCBIfam | HemK family protein methyltransferase | 57 | 353 | IPR004556 | GO:0006479(InterPro)|GO:0008276(InterPro) | |
| Chmo14g01114 | 354 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 85 | 323 | IPR029063 | - | |
| Chmo14g01114 | 354 | PANTHER | - | 18 | 353 | IPR052663 | - | |
| Chmo14g01114 | 354 | Gene3D | Vaccinia Virus protein VP39 | 145 | 353 | IPR029063 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo14g01114 | K02493 | release factor glutamine methyltransferase [EC:2.1.1.297] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 213766 | Chmo14g01114 | Chmo15g01063 | |
| 216541 | Chmo13g01211 | Chmo14g01114 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr13:63708563 | Chmo14g01114 | Chmo-Chr14:58838029 | wgd | |
| Chmo | Chmo-Chr14:58838029 | Chmo15g01063 | Chmo-Chr15:61157735 | wgd |