AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo14g01114 ATGAATCTCACAAGCTTAGTTCGAACCTCATATATCACAAGAACACTCACTAACTCCATTAAACCAATATCTTCATCTCCCTCAATTTCACACACACCCACTTCCTTAAACCCTAAACCCAAAACCCCATTATACCTTAAACCCCCAATATACACCACATCTTTATCATCCCTCAAAAACTTCCAAAAATGGGCCAAAACCAAAACCCTTTCTTCATCATTCCAAGACTCATCAAATTTGCACCAAGAACTCAACTGGTTACTCCAAGATTCCTTACAAAACCCAAATATACTCCATACCCATGAAGAAAATAACAATCTTGTTGCATTAAGATTAAAGCTAGATGATTTGTATGACTTATGGACTCAAAGAATTGAGAAAAGAAGACCTTTTCAGTATATAGTTGGTTGTGAGCATTGGAGGGATTTGATATTGAGTGTTGAAGAAGGGGTTTTGATTCCAAGGCCTGAAACTGAGTTGATTGTGGATTTGGTTAATGATGTGATTAAGGGTGGTGAAAATGGTTATTTGGGGAATGGGTTGTGGGTGGATTTGGGGACTGGGAGTGGCGCTATTGCGATTGGGATTGGGAGGGTTTTAGGGGATTTGGGGAGAGTTGTTGGTGTTGATTTGAGTGACGTTGCGGTGAGAGTTGCGTTGTATAATGTGGAGAAGTATAATTTGCAGGATAAGATTTCTATAAAGCAAGGGTCATGGTTTGAACCGTTGAGTGAGTTCAAAGGACAGGTTGCAGGCCTTGTAAGCAATCCACCATACATACCAAGCGGACACATTGATGGACTCCAACCCGAAGTTGGTAGACATGAACCAATACTGGCATTAGATGGTGGTGATGATGGCATGTCTGACCTTCTTCATATTTGCAATGGTGCTGCTTCGATGCTAAAATCTGGCGGATATTTTGCTTTTGAGACGAACGGTGAAGATCATTGCAGATTTCTGGTGGACCATATGGAAACCATTCACAAAGAAAGCTTCTGTAATCTCAAGATTGTACCAGATTTTGCTGGCATCCAACGTTTTGTAACTGGATTCAGATCATAA 1065 40.56 MNLTSLVRTSYITRTLTNSIKPISSSPSISHTPTSLNPKPKTPLYLKPPIYTTSLSSLKNFQKWAKTKTLSSSFQDSSNLHQELNWLLQDSLQNPNILHTHEENNNLVALRLKLDDLYDLWTQRIEKRRPFQYIVGCEHWRDLILSVEEGVLIPRPETELIVDLVNDVIKGGENGYLGNGLWVDLGTGSGAIAIGIGRVLGDLGRVVGVDLSDVAVRVALYNVEKYNLQDKISIKQGSWFEPLSEFKGQVAGLVSNPPYIPSGHIDGLQPEVGRHEPILALDGGDDGMSDLLHICNGAASMLKSGGYFAFETNGEDHCRFLVDHMETIHKESFCNLKIVPDFAGIQRFVTGFRS 354
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chmo14g01114 354 CDD AdoMet-MTases 183 264 - -
Chmo14g01114 354 ProSitePatterns N-6 Adenine-specific DNA methylases signature. 253 259 IPR002052 GO:0003676(InterPro)|GO:0008168(InterPro)|GO:0032259(InterPro)
Chmo14g01114 354 Pfam Ribosomal protein L11 methyltransferase (PrmA) 182 236 - -
Chmo14g01114 354 NCBIfam HemK family protein methyltransferase 57 353 IPR004556 GO:0006479(InterPro)|GO:0008276(InterPro)
Chmo14g01114 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 85 323 IPR029063 -
Chmo14g01114 354 PANTHER - 18 353 IPR052663 -
Chmo14g01114 354 Gene3D Vaccinia Virus protein VP39 145 353 IPR029063 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo14g01114 K02493 release factor glutamine methyltransferase [EC:2.1.1.297]
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Event-related genes

Select Gene_1 Gene_2 Event_name
213766 Chmo14g01114 Chmo15g01063
216541 Chmo13g01211 Chmo14g01114
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chmo Chmo-Chr13:63708563 Chmo14g01114 Chmo-Chr14:58838029 wgd
Chmo Chmo-Chr14:58838029 Chmo15g01063 Chmo-Chr15:61157735 wgd