Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo14g01118 | ATGGCTCAGAAGAGAACCACCACCACCTCCGCCACCGTACACGGCGGCGACAGCTTACTAGAAAAGCTACCGGAAAGCATCCTTATTAATGAAATATTATTATTAAAACTAGAACCAGAAACACTAACCACACTTTGTTCCTTAGCCTGTGTTTCAACAAGCCTTAAATCATCCGTACATAAAACACTCTCTTCTTTCTCCTCACTCGATCTCTCCACGTTTTCACTCGATTCACAAACATTTGATGGAATAACAAAAAGGTTCCGGAACATCAAGAAGATCACCTTGGATTGCCTCCGTCTGAATGATTCCACTGTAGGAAGTATTCTTGGACCACATGTTGAAGAATTGATTTTGTTGAAATGTTATTCACTCTCTTTTAAACTTTTTACTCGCATTGGGGAAACTTGTCCAAATTTAAGGGTGCTGACCCTTGAGATTTCTGGCTTCATTGAGAAGTCTGCACAACTAATGGGCGTGAACCTTGGAGGCTCAATTGAAAGTTGTCGATACTTGGAGTCCCTCAGAGTTAAAGTTCGTGGAGGAGAAATCAATAATCACAGCCTAATGTTGGGTCGTATCTGCATCTTGATGCCCCAAACGGTCAGGGTCCTCAAGCTTGAACCGGCTTGTGGATCAGATATTTCGGCCTTTATAAGAGTGTTAACTATGAGGGCTCCTATCACTCCTGCGGATGCTGCACAAACGTTGACACACATATCACTAGTTATAGATAAAATTACTGATGATGTTATTCAAACTATTGCACATTGTCTTCCTTTGCTGACTGAGTTGGATCTTAAAGACAGGCCAGAATATGAACCATATGATGACCTATCTGACTTCGGGGTTCAGTCATTAGTTGGCTGTAAGTATCTGACAAGCCTATCCCTTATACGCAGTCGACAACGTATTCTTACTTCATTCAAAAGGGTGACTGATATGGGCATGTTTTTGCTATCAGAGGGTTGCAAAGGATTAGAATCAGTTAGACTTGGTGGGTTTTCTAAAGTGACTGATGCTGGCTTCACATCAATCTTCAATGCATGTTTGAAATTGAAGAAATTTGAGATTCAAAATGCTTCCCTTTTAACAGACTTGACATTCCAAGATGTCAGTAAGGTTCCTAGGTCTCTTGTTGAGGTTAAGTTGGTGTCGTGTAGTTCTATTACCAGCGAGGCTGTGAGTGAATTGGCGACATGCAGTTTGTTAGAGGTTCTTGATTTGCTTGGTTGCAGAAGTGTAGCAGATTCTTGTCTTAACAATGTTTCCCGCCTTGATTTGTTGACATGTTTAAACTTAGGGGGTGCGGATGTTACTGATGTTGGTATGAAGGTTTTAGGTATAGGGAATGCGCCTATTGCTTGCTTATCTTTAAGAGGCTGCAAGAGGGTAACCGATAAAGGGATCATGTTTTTGTTACGAAGTGAAGGAAAAATCACCAAAAATTTGTCATCTCTTGATCTCGGTCACATGCCTGGAATTACAGATAATGCTATTGCCACCATTGCTGATGTTTGTGCAGGGCTTACAGAACTGTGCATCAGAAACTGTTTTCATGTTACAGATGCATCCGTGAAGACTTTAGCTTTTATGGGAAGGTTACGGAGGCTCGATCTGTATAATTGTACTGCATTATCCGCTAAATCTTCTGAATATCTGAAGAAGCCTTTGTTTCGTGGCTTACAATGGATTGGAATTGGAGGGACCCGAATGTTTTGTGGAGATGTTGGGTTAGCTGAAATATACAATGAAAAACGCTGGTTGTTTATGTGTGCTGATGGTTGTGAGGTGGGATGTCACGATGGATGGCAATATCATAAAACTTGA | 1830 | 41.2 | MAQKRTTTTSATVHGGDSLLEKLPESILINEILLLKLEPETLTTLCSLACVSTSLKSSVHKTLSSFSSLDLSTFSLDSQTFDGITKRFRNIKKITLDCLRLNDSTVGSILGPHVEELILLKCYSLSFKLFTRIGETCPNLRVLTLEISGFIEKSAQLMGVNLGGSIESCRYLESLRVKVRGGEINNHSLMLGRICILMPQTVRVLKLEPACGSDISAFIRVLTMRAPITPADAAQTLTHISLVIDKITDDVIQTIAHCLPLLTELDLKDRPEYEPYDDLSDFGVQSLVGCKYLTSLSLIRSRQRILTSFKRVTDMGMFLLSEGCKGLESVRLGGFSKVTDAGFTSIFNACLKLKKFEIQNASLLTDLTFQDVSKVPRSLVEVKLVSCSSITSEAVSELATCSLLEVLDLLGCRSVADSCLNNVSRLDLLTCLNLGGADVTDVGMKVLGIGNAPIACLSLRGCKRVTDKGIMFLLRSEGKITKNLSSLDLGHMPGITDNAIATIADVCAGLTELCIRNCFHVTDASVKTLAFMGRLRRLDLYNCTALSAKSSEYLKKPLFRGLQWIGIGGTRMFCGDVGLAEIYNEKRWLFMCADGCEVGCHDGWQYHKT | 609 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo14g01118 | 609 | SUPERFAMILY | RNI-like | 312 | 574 | - | - | |
| Chmo14g01118 | 609 | SUPERFAMILY | RNI-like | 43 | 366 | - | - | |
| Chmo14g01118 | 609 | PANTHER | UNCHARACTERIZED | 48 | 400 | - | GO:0019005(PANTHER)|GO:0031146(PANTHER) | |
| Chmo14g01118 | 609 | SMART | LRR-CC-2 | 481 | 506 | IPR006553 | - | |
| Chmo14g01118 | 609 | SMART | LRR-CC-2 | 507 | 530 | IPR006553 | - | |
| Chmo14g01118 | 609 | SMART | LRR-CC-2 | 451 | 476 | IPR006553 | - | |
| Chmo14g01118 | 609 | SMART | LRR-CC-2 | 532 | 568 | IPR006553 | - | |
| Chmo14g01118 | 609 | SMART | LRR-CC-2 | 401 | 426 | IPR006553 | - | |
| Chmo14g01118 | 609 | SMART | LRR-CC-2 | 324 | 349 | IPR006553 | - | |
| Chmo14g01118 | 609 | SMART | LRR-CC-2 | 350 | 375 | IPR006553 | - | |
| Chmo14g01118 | 609 | Gene3D | Ribonuclease Inhibitor | 53 | 476 | IPR032675 | - | |
| Chmo14g01118 | 609 | Gene3D | Ribonuclease Inhibitor | 479 | 558 | IPR032675 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo14g01118 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr13:63953276 | Chmo14g01118 | Chmo-Chr14:59221504 | dispersed | |
| Chmo | Chmo-Chr13:64120282 | Chmo14g01118 | Chmo-Chr14:59221504 | dispersed | |
| Chmo | Chmo-Chr14:59221504 | Chmo15g01067 | Chmo-Chr15:61464241 | dispersed | |
| Chmo | Chmo-Chr14:59186402 | Chmo14g01118 | Chmo-Chr14:59221504 | tandem |