AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo14g01122 ATGCAAAGACACCGTAACCAATCTAACGGATTCCGTTCAAACGGTCCGGTGTACCGGAATTACAACAACCGTGGCGGCGGCGGCGGCGGTGGTTACAGGGGCCCACCGCCGCCACGTAGGATTGATGTTTTTATGGAAGCTGGTAGGTTAGCTACTCAGTATTTACTTGCTAAAGGTTTACTTAATAATAATTATTATAATAATAAAGGGCAAAATAATTATAGTACTAATAATGATGTTAATGATGTTAAGAGTCCCGTTGTTGTTTCGGATATACGAGATGAGAGTAAGGTTGTTAGGAGGACTGTTAAGGATCCTAGAATTGAGCTGAGTAATAATGAGATTAGTAAGAATTCGGAGAAAATAGGTGAGGGCGATGAGGCGGTTTTAGGTGGTGAGGAGGTAAAACCGGTGGTGTCGGGTGATTTGGAATTAAGGAATGTGGAGACGAAGGTTGAGAATGAAGAGAAGGAATTGCGTGATGAGGACGTGGGCGTTGAGGCGCCAGTTTTGGAAGTTACGAAGATGGAAGGTGTCGAGTCCGAGGAGAAAATTGTTGATGTTAAGAATGTAGATGTGAAGACGGAGGAGGATGTGATGATGGATGATGGTGATAAAAAGGATGAGAAGACGGTTGTTGAAGAAGACGTGATGGAAGAGAATGAGAATGAGAATGGGAAGGATAGTGGTAGTGATTTGTTGACGTTGATTAGGGATGATAATGTACCGACTAGGACTCGTTCTTCTCTGACTCTCAAGGGGTCTAAAAGTGATCCGGTATTGATATCCGGAGATGAAAATAGGACGAAAGAACAGAATTTGGAAGAAGCTGAACCCAAACCTGAACCTGAACCTGAACAAGGATTGGAAATGAAACTTGAACCCAAGGTTAAACAACTGACTTGTGATGAGGATGACATGTACAAATTTGGACTAGGGTTACATATGCGGTCTCAGTCGTTTCCTCAAAGATCTGTTTCCGAGCTAGCAATAAGTGACGGGCATCAGGAGTATAGTAGAAGCAGTTCTGATGTATTGGGTAGAGGTGAAAAACGACCATTGGAAATTAATGATTTCACGGATATATCTAAGAAACCTAGGGATTGGGCCTCTGCAAGTCCTCCACCGCATAATTACTTTAATCTTTCAAGCTCAAGAGGAGATCAGTCGTCTTCTCACGAGGGTGGTTCTTATGCAGAAGAGAAGCAGCTCTTTCCCAACTCGTTTAAGATATGTGACCTTAATTTAACAGGAGGTTCGGAAGCAAATGAAAATCGTGATACGAAGTCTGCCATTGGGTTTTTGCCACAAGCAAAGCAGGAACCGGTGTCGGTTGACTTTGACTTGACTATGAATAATAGCTGTGGTATAGTTGATAGACATGTTAGGCGTGGAATTGATGGCAAAGGGGTTGAAGTCATTGACTTGGATTGTGATTCCGTGCAAGACGGCAACAATAACTCAGACCGGAGGGATGAAGCTATATTTACCGATCTTGAGAGCTTTCCGGACAATATACAAAGGGTAAGTGACCTTCCCCAAGATGGTTACGGTCTTATGATATCGGAGTTGCTAGATGCTGATATTCCTAATTCAAGTGTATCAACGGGCGTTAATTCTATGCATAATGAAATGAGCCTCCAAAATGAGGAGGGGATTCTTGGTGATGATGACTCGATATATATGTCACTGGGAGAAATACCAATAAGTTTCGTGCCAGTCTGGGATCAGCAGCCTTCACAAAGATATGATAAGCGCTATTAA 1764 42.74 MQRHRNQSNGFRSNGPVYRNYNNRGGGGGGGYRGPPPPRRIDVFMEAGRLATQYLLAKGLLNNNYYNNKGQNNYSTNNDVNDVKSPVVVSDIRDESKVVRRTVKDPRIELSNNEISKNSEKIGEGDEAVLGGEEVKPVVSGDLELRNVETKVENEEKELRDEDVGVEAPVLEVTKMEGVESEEKIVDVKNVDVKTEEDVMMDDGDKKDEKTVVEEDVMEENENENGKDSGSDLLTLIRDDNVPTRTRSSLTLKGSKSDPVLISGDENRTKEQNLEEAEPKPEPEPEQGLEMKLEPKVKQLTCDEDDMYKFGLGLHMRSQSFPQRSVSELAISDGHQEYSRSSSDVLGRGEKRPLEINDFTDISKKPRDWASASPPPHNYFNLSSSRGDQSSSHEGGSYAEEKQLFPNSFKICDLNLTGGSEANENRDTKSAIGFLPQAKQEPVSVDFDLTMNNSCGIVDRHVRRGIDGKGVEVIDLDCDSVQDGNNNSDRRDEAIFTDLESFPDNIQRVSDLPQDGYGLMISELLDADIPNSSVSTGVNSMHNEMSLQNEEGILGDDDSIYMSLGEIPISFVPVWDQQPSQRYDKRY 587
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chmo14g01122 587 MobiDBLite consensus disorder prediction 1 37 - -
Chmo14g01122 587 PANTHER PROTEIN, PUTATIVE-RELATED 3 83 IPR040276 -
Chmo14g01122 587 MobiDBLite consensus disorder prediction 1 20 - -
Chmo14g01122 587 MobiDBLite consensus disorder prediction 263 296 - -
Chmo14g01122 587 MobiDBLite consensus disorder prediction 327 343 - -
Chmo14g01122 587 MobiDBLite consensus disorder prediction 194 214 - -
Chmo14g01122 587 MobiDBLite consensus disorder prediction 241 256 - -
Chmo14g01122 587 MobiDBLite consensus disorder prediction 344 365 - -
Chmo14g01122 587 MobiDBLite consensus disorder prediction 194 296 - -
Chmo14g01122 587 MobiDBLite consensus disorder prediction 327 398 - -
Chmo14g01122 587 MobiDBLite consensus disorder prediction 376 397 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo14g01122 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
213770 Chmo14g01122 Chmo15g01072
216544 Chmo13g01220 Chmo14g01122
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chmo Chmo-Chr13:64360824 Chmo14g01122 Chmo-Chr14:59350058 wgd
Chmo Chmo-Chr14:59350058 Chmo15g01072 Chmo-Chr15:61752041 wgd