Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo15g00395 | ATGACGGGAAAGAAGCGATTTGCTTCGAAATCAGTGATATTGTTATTGGTATTAATATGTATCGTTGTATTAGTGGGGTTATTATCTCAATTTAAGCTTCAGTCATCTACTGAATTCAGTTACAATCATGACTTAATCGAGTATCCGATACTAAAGAAGAATAAGATTGCTTTTTTATTTCTTGTTAGAGATAACCTTCCTCTTGATTTCCTTTGGCATAATTTCTTCAAGAACGCAGATCCTGAGAATTTCACAATCTACATACACTCGAAGCCTGGCATTCTGTTTGACAAGTCAGTTACCAAATCAGTTTTCTTCTACAATCGGCAGTTGAGGAACAGCGTTGAGGTCGGTTGGGGTACACCAACTATGATTGAAGCAGAGAAGCTGTTGTTCAAGGCAGCCCTTGATGATCCAACAAATCAGATATTCATTCTCCTCTCTGACAGCTGTGTCCCTCTGTATAATTTCAGTTATATATACAAATATCTCATGTCATCTCTGAGAAGTTTTGTGGACAGCTTTATAGATGCGACGGATGATCCCAGGGAAAAACGCTATAACCCAGAGATGTCCCCTGACATACCCGAAGACAAATGGCGGAAAGGATCTCAGTGGATCACATTGGTCAGAAGGCATGCAGAGGTGGTTGCATATGATCACGCTGTTTTCCCAATCTTTGAAAAACACTGCAAGCGGCGACCTCTTCTAGACTTGAGCAAGGGAAACGAATCTCTTATAGAACAACAGCAACACAATTGCATCCCAGATGAACATTATGTGTCAACCTTACTTGCAATGCGTGGATTTGAAGCTGAATTGGAGCGAAGAACATTAACTTATTCTTTATGGAACCAGTCTACTGAACCGATGAATACACAAGCCTGGCATCCTGTAACATTTGGTTTTTCAAGTGCGAGCCAGAAAAATATTCAAGATATTAAGAATATTGATCATGTTTATTTTAAGCCTGAAAACCGGACTGAATGGTGTGGTACTAAATCTGGTAGCGGTCATTGTTATTTATTTGCTAGGAAATTCTCGCGTGGTGCAGCCATGCGACTTTTGACCAATGGGGTAGTTGGTCCCTATGATCCCAGCACATTGTTCTTAGACCCAACATAG | 1125 | 40.27 | MTGKKRFASKSVILLLVLICIVVLVGLLSQFKLQSSTEFSYNHDLIEYPILKKNKIAFLFLVRDNLPLDFLWHNFFKNADPENFTIYIHSKPGILFDKSVTKSVFFYNRQLRNSVEVGWGTPTMIEAEKLLFKAALDDPTNQIFILLSDSCVPLYNFSYIYKYLMSSLRSFVDSFIDATDDPREKRYNPEMSPDIPEDKWRKGSQWITLVRRHAEVVAYDHAVFPIFEKHCKRRPLLDLSKGNESLIEQQQHNCIPDEHYVSTLLAMRGFEAELERRTLTYSLWNQSTEPMNTQAWHPVTFGFSSASQKNIQDIKNIDHVYFKPENRTEWCGTKSGSGHCYLFARKFSRGAAMRLLTNGVVGPYDPSTLFLDPT | 374 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo15g00395 | 374 | Pfam | Core-2-I-Branching enzyme | 56 | 314 | IPR003406 | GO:0016020(InterPro)|GO:0016757(InterPro) | |
| Chmo15g00395 | 374 | PANTHER | CORE-2-I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED | 16 | 356 | IPR044174 | GO:0016757(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo15g00395 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr15:20515340 | Chmo15g04925 | Chmo-Chr15:299732854 | dispersed | |
| Chmo | Chmo-Chr13:24991121 | Chmo15g00395 | Chmo-Chr15:20515340 | wgd | |
| Chmo | Chmo-Chr13:326498065 | Chmo15g00395 | Chmo-Chr15:20515340 | wgd | |
| Chmo | Chmo-Chr14:22259626 | Chmo15g00395 | Chmo-Chr15:20515340 | wgd | |
| Chmo | Chmo-Chr14:308293021 | Chmo15g00395 | Chmo-Chr15:20515340 | wgd |