Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chmo15g00403	ATGAACGAGTCGGACTCATCATCGTTTTCCCGTCTCAATGAGGTGGAGAAGATCATTGGATACGAATTCAAGAACAAAGAGTTATTAAAAGAAGCTTTTACTCATAATTCTTACAAAGATGACAATTGTCCATCGTACGAGCGGCTTGAATACCTTGGAGACTCGTTTTTGAACCATATAATTGCCAGAGAACACTTTTTTCTATATCCAAGGATGAAGTCTGGTGAGTTGACTCAGCTTCGTGCCGCCAATGTTGATACTGAAGCATTGGCTCGTGTTGCATTCAAACATGGCTTACATAGGTTTCTTAGGCACCAAGATCCTCTACTCGAGGGACGGGTACAAGAACTTATGGAAGGAATCAAACAGTATCCATTGCACTCCCATGGTTTAATCAATTCACCTAAGATACTTGCAGACATTGTGGAGTCTTTAATTGGTGCAGTCTATGTGGACACCAATTTGTCGGTCGATGCTACATGGGAGGTGGTGAAGAGCTTGTTACAACCTTTGACAACCCCAGAGAACCTCAAGCTAAACCCCGTGACAAAGTTGAATGAAACGTGCCAAAAGATCGGGATCAAATTGGAATACAAAAATTTATGGGTCGAGTCGGGGGAGATTGAGATATATAATGGCAACGAGTTAATCGGGAAAGGAAACTACAAGAAAAAGAAAACGACAGCGAAGAACAAAGCAGCAGCCGATGCATACGTGAATCTTGTCAAACAATTGGGACTCAAAGATGATACAGAATTTGATGAATTATTACTTTAA	777	41.06	MNESDSSSFSRLNEVEKIIGYEFKNKELLKEAFTHNSYKDDNCPSYERLEYLGDSFLNHIIAREHFFLYPRMKSGELTQLRAANVDTEALARVAFKHGLHRFLRHQDPLLEGRVQELMEGIKQYPLHSHGLINSPKILADIVESLIGAVYVDTNLSVDATWEVVKSLLQPLTTPENLKLNPVTKLNETCQKIGIKLEYKNLWVESGEIEIYNGNELIGKGNYKKKKTTAKNKAAADAYVNLVKQLGLKDDTEFDELLL	258

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chmo15g00403	258	SMART	riboneu5	27	177	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Chmo15g00403	258	SUPERFAMILY	RNase III domain-like	12	173	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Chmo15g00403	258	SUPERFAMILY	dsRNA-binding domain-like	136	241	-	-
	Chmo15g00403	258	PANTHER	DICER-RELATED	10	247	-	GO:0003723(PANTHER)\|GO:0004525(PANTHER)\|GO:0005634(PANTHER)\|GO:0005737(PANTHER)\|GO:0030422(PANTHER)
	Chmo15g00403	258	ProSitePatterns	Ribonuclease III family signature.	47	55	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Chmo15g00403	258	Gene3D	Ribonuclease III domain	7	175	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Chmo15g00403	258	CDD	RIBOc	27	177	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Chmo15g00403	258	ProSiteProfiles	Ribonuclease III family domain profile.	12	154	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Chmo15g00403	258	Pfam	Double-stranded RNA binding motif	181	238	IPR014720	-
	Chmo15g00403	258	FunFam	Endoribonuclease dicer-like 1	6	175	-	-
	Chmo15g00403	258	Gene3D	-	176	244	-	-
	Chmo15g00403	258	Pfam	Ribonuclease III domain	47	153	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chmo15g00403	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	49115	Chmo15g00403	Chmo1g02153
	49116	Chmo15g00403	Chmo3g02465
	213582	Chmo14g00543	Chmo15g00403
	226165	Chmo15g00403	Chmo13g00560
	238905	Chmo13g00560	Chmo15g00403

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chmo	Chmo-Chr15:20840588	Chmo15g01170	Chmo-Chr15:66784468	dispersed
	Chmo	Chmo-Chr15:20840588	Chmo15g00404	Chmo-Chr15:20863823	tandem
	Chmo	Chmo-Chr1:107166643	Chmo15g00403	Chmo-Chr15:20840588	wgd
	Chmo	Chmo-Chr13:25242109	Chmo15g00403	Chmo-Chr15:20840588	wgd
	Chmo	Chmo-Chr14:22548517	Chmo15g00403	Chmo-Chr15:20840588	wgd
	Chmo	Chmo-Chr15:20840588	Chmo3g02465	Chmo-Chr3:119716509	wgd