Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo15g00451 | ATGCAATTCTTGACGACAACAACAAACCCATCATTCACATACCCACCACCAATCCACCAATCCAAACACCACCCAATGTTTCCTCTCAAAACCCCATCAAAACCCCACCCCATAAAATCCCAAAAAAACTCAGGGTTTTTATCAGCAATTGGTAATGCAATTGAAGAGCAAGAGTATAGGAAAGCTAGAGCTGAAGTTGTAAGGAAAGGGACTGGTTTAGATGGTTATAATATTGAAGGGATTTCAATTGGTGGTCATGAAACTTGTGTTATTATTCCTGAATTGAAATGTGCTTTCGATATTGGCCGGTGTCCTGCGCGAGCTGTGGCCATGAATTTCTTGTTTATTACTCATGGACATCTTGATCATATTGGTGGGCTACCCATGTATATTGCTACACGTGGTTTATACAGCATGACTCCACCAACTGTATTTGTACCTCCTTCCATCAAAGATGATGTTGAAAACTTGATTGAGCTTCACAGGAAGATGGGTCAAGTGGAATTGAATGTCGATTTGGTTGCATTGGATATAGGAGAAACATACGAGCTACGAAACGACCTTGTTGTACGCCCATTTAAAACACACCATGTCATACCGAGTCAGGGTTATGTCATTTACTCTGTTCGCAAGAAGCTCAAGAAGCAATATATTCATCTAAAAGGAAGGGAAATTGAGAAAAAGAAGAAATCTGGTGTCGAGATAACGGATATCATATTGTCTCCTGAGGTGGCATTCACCGGAGATACAACTTCTGATTTTCTACTTGATCCAAGAAGCTCTGATGCCTTGAGAGCAAAAGTTCTTATAACTGAGGCTACTTTTTTGGACGATAAATGTGACATTGAGCATGCACGAGAACATGGTCACATGCATATTGACGAGATTATAGAGAATGCTAAGTGGATCCGTAACAATGCGGTTCTTTTGACCCATTTCTCCTCCCGCTACCATATCGAGGAAATTCGTCAAGCTGTGACGAAGTTACAGTCGAAGGTTTCAGCCAAAGTGGTTCCTCTTACAGAAGGTTTTAGATCAATGTACTCAACATAA | 1053 | 40.74 | MQFLTTTTNPSFTYPPPIHQSKHHPMFPLKTPSKPHPIKSQKNSGFLSAIGNAIEEQEYRKARAEVVRKGTGLDGYNIEGISIGGHETCVIIPELKCAFDIGRCPARAVAMNFLFITHGHLDHIGGLPMYIATRGLYSMTPPTVFVPPSIKDDVENLIELHRKMGQVELNVDLVALDIGETYELRNDLVVRPFKTHHVIPSQGYVIYSVRKKLKKQYIHLKGREIEKKKKSGVEITDIILSPEVAFTGDTTSDFLLDPRSSDALRAKVLITEATFLDDKCDIEHAREHGHMHIDEIIENAKWIRNNAVLLTHFSSRYHIEEIRQAVTKLQSKVSAKVVPLTEGFRSMYST | 350 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo15g00451 | 350 | PANTHER | TRNASE Z TRZ1 | 36 | 344 | - | - | |
| Chmo15g00451 | 350 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
| Chmo15g00451 | 350 | SUPERFAMILY | Metallo-hydrolase-oxidoreductase | 110 | 327 | IPR036866 | - | |
| Chmo15g00451 | 350 | Gene3D | - | 76 | 345 | IPR036866 | - | |
| Chmo15g00451 | 350 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
| Chmo15g00451 | 350 | CDD | RNaseZ-MBL-fold | 75 | 273 | - | - | |
| Chmo15g00451 | 350 | Pfam | Beta-lactamase superfamily domain | 110 | 313 | IPR001279 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo15g00451 | K00784 | ribonuclease Z [EC:3.1.26.11] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 226176 | Chmo15g00451 | Chmo13g00611 | |
| 238916 | Chmo13g00611 | Chmo15g00451 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr15:23410313 | Chmo4g03820 | Chmo-Chr4:247074161 | dispersed | |
| Chmo | Chmo-Chr13:27591073 | Chmo15g00451 | Chmo-Chr15:23410313 | wgd |