Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chmo15g00452	ATGGCTAAGAGGTTGCTCGATGCTTTGATAGAAGAGGAGGAAAAAAGCAAATTTGTCGAGAATAATGAGCAGGCACAAGGTGGTGATTGGTTGACCCGTAGCACCTCATGGTTGACCAATGTTGTTGCTGGTGCGGCAGGAACCGTAGGTGGGTATTTGGCAAGTAAAAAGGACACAACAAATGAAGACCCATTACTTAATCAGCAACTGTCTGAAAGAAAAGTGGAGGTGTTCGTCTGGGATGCTCTTGGTTCGGAAGCTGTTGAGTCAGCTGACCATGTAGTGGAAGTTTACACTGCTGAGCCTCAAAATGGAAACTGTAAACGGGTGAGATATTGGTATAATGGGGTTCAAGTTGGGTCATCTGATGTTGTGCCTAGTGTTGGTGGTGTTGTGATTGTTGGTAATGGTGTTAGTTGTGAGTTGGAGGTGAAGTGGCATTATAGTTATGGGACTTGGGTTGGCCCGGTTTCGGTTTCGGATAGTGGGACTGCTTCTATTAAGGTTGATGGCATGGAAATCAAAGTAACACTAGACGTGGTGAATAAAGAAGGATCTATGAAACTTTCCATCGTGGAATGTAATTGTCATATAAATGATATCTCCATAGATTTAGATGGAGGAGCATCTTGGCTCTATCAAGGGATTGTGGATGCTTTTGAAGATGAAATACTCTCAGCAGTAGAAAAAGCAATTACCAAGACACTGAAAGCCGGAATTTCACACCTTGAATCAATGTTACAAACTCTTCCGAAACAAATCCCAGTGGATGATACTGCTTCATTAAATGTTACATTTGTTAACAACCCTTATACGAGCGACACTTCACTAGGCGTTGAGATAAATGGGTTGTTTATACAAAATAAAACCCACGCACATTCATACCACAACGGTTTGCAGCCACCAGTTTCTTGTTCAGAATCTTCAAAGATGATTGGAATTGCCTTAGATGAAGCTGTTTTTAAATCTGCATCTGCCTTATACTATAATGCTAAGTTTATGCACTGGATTGTGGATAAAATTCCGCAACAATCTCTAATGAACACAGCGGGATGGAGATTTATTGTGCCTCAACTTTACAGGAAATACCCAAATGCTGATATGAATTTGGACATTACACTGTCTGATCCTCCAGTTATGCAGATATCATGGCAGAAAATTGGTGCAATCGTCTATGCAGACTTAATTATAGATGTTCTTGAAGGCGATGACACAATACCTGTTGCTTGTATCTCACTGGTAATTGCTGGCACGGGTTCAGTTGAAATTGTAGGAAACAACCTTACGGGTCATATGAATTTGGATGATTTCACCATGTCGTTGAAATGGAGCAAGATTGGCACCTTGCACATGTTTCTTATTCAGCCAGTGATGTGGACGATCATTGAAACGGTTTTCTTGCCATATGCGAATGCACGACTTGGGGTTGGCTTCCCGTTGCCTATAATACGTGGTTTTATGCTACAAAATGCTGAGATAATACCCTCAGATTCAAGAATCACGGTCTGCAGTGACGTTGCTTATGAGGAATATGTTGCTATTAGCCGATCCCTCGTTTACACTTCATGA	1569	41.49	MAKRLLDALIEEEEKSKFVENNEQAQGGDWLTRSTSWLTNVVAGAAGTVGGYLASKKDTTNEDPLLNQQLSERKVEVFVWDALGSEAVESADHVVEVYTAEPQNGNCKRVRYWYNGVQVGSSDVVPSVGGVVIVGNGVSCELEVKWHYSYGTWVGPVSVSDSGTASIKVDGMEIKVTLDVVNKEGSMKLSIVECNCHINDISIDLDGGASWLYQGIVDAFEDEILSAVEKAITKTLKAGISHLESMLQTLPKQIPVDDTASLNVTFVNNPYTSDTSLGVEINGLFIQNKTHAHSYHNGLQPPVSCSESSKMIGIALDEAVFKSASALYYNAKFMHWIVDKIPQQSLMNTAGWRFIVPQLYRKYPNADMNLDITLSDPPVMQISWQKIGAIVYADLIIDVLEGDDTIPVACISLVIAGTGSVEIVGNNLTGHMNLDDFTMSLKWSKIGTLHMFLIQPVMWTIIETVFLPYANARLGVGFPLPIIRGFMLQNAEIIPSDSRITVCSDVAYEEYVAISRSLVYTS	522

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chmo15g00452	522	PANTHER	OS06G0309200 PROTEIN	115	517	IPR045897	-
	Chmo15g00452	522	Pfam	LBP - BPI - CETP family, N-terminal domain	117	243	IPR017942	GO:0008289(InterPro)
	Chmo15g00452	522	SUPERFAMILY	Bactericidal permeability-increasing protein, BPI	277	508	IPR017943	GO:0008289(InterPro)
	Chmo15g00452	522	CDD	BPI2	311	506	-	-
	Chmo15g00452	522	Coils	Coil	2	22	-	-
	Chmo15g00452	522	SMART	bpi2-2	306	504	IPR001124	GO:0008289(InterPro)
	Chmo15g00452	522	SUPERFAMILY	Bactericidal permeability-increasing protein, BPI	125	273	IPR017943	GO:0008289(InterPro)
	Chmo15g00452	522	Pfam	LBP - BPI - CETP family, C-terminal domain	293	508	IPR001124	GO:0008289(InterPro)
	Chmo15g00452	522	Gene3D	-	117	248	-	-
	Chmo15g00452	522	Gene3D	-	249	494	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chmo15g00452	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	213596	Chmo14g00590	Chmo15g00452
	226177	Chmo15g00452	Chmo13g00612
	238917	Chmo13g00612	Chmo15g00452

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chmo	Chmo-Chr14:25559977	Chmo15g00452	Chmo-Chr15:23433827	dispersed
	Chmo	Chmo-Chr15:23433827	Chmo16g00901	Chmo-Chr16:38478195	dispersed
	Chmo	Chmo-Chr13:27596035	Chmo15g00452	Chmo-Chr15:23433827	wgd
	Chmo	Chmo-Chr14:25558470	Chmo15g00452	Chmo-Chr15:23433827	wgd