AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo15g00481 | ATGAGGAAGAGTCCAAAAGTAGCCGATGAAAGCATGTTTGGAGAAGGAAATGGACCAGAGTTTCCAAATATGTCTCAGCATACAAGGCAAGGGTTCGCAAGTGGTCTTTCTATTATATATACTATCATAAGAGCTCCGTTCTCACTTCTATCATGCCTATCGTCCCACAACCATATAAGTGGTGCCGCTGATGGAGTATGGGTCTCTGGAGAGTTTTCACGGATGTCTGACATTAATCATCTTGTGGTTAGCGATAGCATGCGCTATGCTATTTTGATCCAAAATCTTCAGCAAGCACCACGGAACCCTCAAAAGGGTTCCGTCCGTGTTAATTTTTGGTGCCGGCGAGGAGGCAAGTCCTCCAAGTCTTCCAAAAATGGATTTGGAGATGTAGGTGGTGTAGAGAATAACTCTAATGGGATGAGTGTTGGAGATTTTGGAGGTGATGGTGATTTTTATGTTTGGATGGGAGCCGGTGGTGGTGAGCTAGGAGTCTTTGTTGGTGGTGGAGTAGTGATAGTGATAGGTGATTGTGGAGGTGGTGTAGGGGTAGCCAAAGTGAGAGTGGTCTCATCTCTTATGGGTGATGAGATGGTTAATGGAGAGGACTCAGAAGAAGAGCTTATGTTGACAAAACAACAAGGTCTTACGCTCATTCTAGCGGTTCTTTTGCAAGGTTTTGTTGATGGTGATGACTTAGTCATTTTTGGCTAA | 714 | 44.4 | MRKSPKVADESMFGEGNGPEFPNMSQHTRQGFASGLSIIYTIIRAPFSLLSCLSSHNHISGAADGVWVSGEFSRMSDINHLVVSDSMRYAILIQNLQQAPRNPQKGSVRVNFWCRRGGKSSKSSKNGFGDVGGVENNSNGMSVGDFGGDGDFYVWMGAGGGELGVFVGGGVVIVIGDCGGGVGVAKVRVVSSLMGDEMVNGEDSEEELMLTKQQGLTLILAVLLQGFVDGDDLVIFG | 237 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo15g00481 | 237 | PANTHER | BNAC03G44900D PROTEIN | 1 | 92 | - | - | |
| Chmo15g00481 | 237 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo15g00481 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 49124 | Chmo15g00481 | Chmo23g04705 | |
| 49125 | Chmo15g00481 | Chmo24g04708 | |
| 49126 | Chmo15g00481 | Chmo3g02411 | |
| 226183 | Chmo15g00481 | Chmo13g00645 | |
| 238923 | Chmo13g00645 | Chmo15g00481 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr2:122933717 | Chmo15g00481 | Chmo-Chr15:25288803 | transposed | |
| Chmo | Chmo-Chr2:213061878 | Chmo15g00481 | Chmo-Chr15:25288803 | transposed | |
| Chmo | Chmo-Chr1:109754308 | Chmo15g00481 | Chmo-Chr15:25288803 | wgd | |
| Chmo | Chmo-Chr13:30075769 | Chmo15g00481 | Chmo-Chr15:25288803 | wgd | |
| Chmo | Chmo-Chr15:25288803 | Chmo2g01977 | Chmo-Chr2:93199468 | wgd | |
| Chmo | Chmo-Chr15:25288803 | Chmo22g04715 | Chmo-Chr22:288536683 | wgd | |
| Chmo | Chmo-Chr15:25288803 | Chmo23g04705 | Chmo-Chr23:281961906 | wgd | |
| Chmo | Chmo-Chr15:25288803 | Chmo24g04708 | Chmo-Chr24:286204257 | wgd | |
| Chmo | Chmo-Chr15:25288803 | Chmo3g02411 | Chmo-Chr3:117188045 | wgd |