Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo15g00524 | ATGTCTAACAGAAGTAATATTGATAGAGCTATGGCTACTTATTATAAGAAACCACGGATACGAGATGGCGCGGTTCGTAGGTTTCTTTTCGTAGTTTCGTTAACTTTAGCTGGGGTGTTTTTGTTGTGTTTTCTAGTTGGGATGAATTCGAGTAGTAGTGAGTTAATGCCAGAGAATGAGGTTGAGATTGATAGTATTACGGAAGTTAATTTTAATGTATCGGGTTTGGTTGGTAGTGTTAAGTTGCCTAAGCACAATTATTTGTCGAAAATGTTGGAGGGTAAGAATCAGTTGGCACCAAGGAACATGGATTTGTATCCAAGTTTGGCGAAGGATAGGATAGTTATTGTTCTTTATGTGCACAATCGTCCGCAGTATCTTAAATTAGTTGTGGATAGTTTATCACGTGTGTCGGGAATTAATGAGACTTTGTTGATTGTAAGTCATGACGGATACTTTGACGCAATGAATAAGATTGTGGAAGATATTAGGTTTTGTCAAGTGAAGCAAGTATTTGCGCCTTTTTCGCCTCATATATTTCCGAATGGATTCCCTGGTGTGTCGCCTAATGATTGTAAAGAAAAAGATGACCCGATTGAGAAAAAATGTGAAGGGAGTACTGATCAGTATGGGAATCATCGGTCTCCGAAGATTGTGTCGTTGAAGCATCATTGGTGGTGGATGATGAACACGGTATGGGATGGGCTCAAGGAAACAATAGGTCATTCGGGTGATGTTCTTTTTATAGAAGAAGATCACTTCATTTTCCCAAACGCGTATCAAAATTTGAAGATATTAACGGAGTTGAAACCTACCAAATGTCCGGATTGTTATGCTGTGAATCTTGCTCCAAGTAACGTGAAATCTAGAGGTGAAGGTTGGAATAGTTTAATAGCCGAAAGAATGGGTAACATTGGGTATACTTTTAATAGAACGGTATGGAGGAAAATACATAGAAAAGCTAAAGAGTTTTGTTTCTTTGATGATTATAATTGGGATATAACAATGTGGTCGACGGTGTATCCTTCTTTCGGTGGTTCAGTTTACTCTATGCGAGGGCCTAGGGCTAGTGCGGTTCATTTTGGGAAATGTGGGTTGCATCAAGGTCAAGGTGAAAACGCTGCTTGTGTTGATAATGGTGTGGTGAATATTGACACTGAAGAGATTGATAAGGTTGCCAACATTAAACCCGAGTGGGGAGTACATGTGTTTAGAAATCAAGAAGGGTATCAAGCTGGATTTAGAGGGTGGGGAGGTTGGGGAGATAAAAGAGACCATCAATTATGCTTGGATTTTGCTAAAATGTATCATGTGAGGAACAAAGCATCTTAA | 1332 | 39.26 | MSNRSNIDRAMATYYKKPRIRDGAVRRFLFVVSLTLAGVFLLCFLVGMNSSSSELMPENEVEIDSITEVNFNVSGLVGSVKLPKHNYLSKMLEGKNQLAPRNMDLYPSLAKDRIVIVLYVHNRPQYLKLVVDSLSRVSGINETLLIVSHDGYFDAMNKIVEDIRFCQVKQVFAPFSPHIFPNGFPGVSPNDCKEKDDPIEKKCEGSTDQYGNHRSPKIVSLKHHWWWMMNTVWDGLKETIGHSGDVLFIEEDHFIFPNAYQNLKILTELKPTKCPDCYAVNLAPSNVKSRGEGWNSLIAERMGNIGYTFNRTVWRKIHRKAKEFCFFDDYNWDITMWSTVYPSFGGSVYSMRGPRASAVHFGKCGLHQGQGENAACVDNGVVNIDTEEIDKVANIKPEWGVHVFRNQEGYQAGFRGWGGWGDKRDHQLCLDFAKMYHVRNKAS | 443 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo15g00524 | 443 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 113 | 373 | IPR029044 | - | |
| Chmo15g00524 | 443 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 112 | 437 | IPR029044 | - | |
| Chmo15g00524 | 443 | Pfam | N-acetylglucosaminyltransferase II (MGAT2) | 100 | 429 | IPR007754 | GO:0005795(InterPro)|GO:0008455(InterPro)|GO:0009312(InterPro)|GO:0016020(InterPro) | |
| Chmo15g00524 | 443 | PANTHER | BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE II | 25 | 438 | IPR007754 | GO:0000139(PANTHER)|GO:0005795(InterPro)|GO:0006487(PANTHER)|GO:0008455(InterPro)|GO:0008455(PANTHER)|GO:0009312(InterPro)|GO:0016020(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo15g00524 | K00736 | alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [EC:2.4.1.143] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 213617 | Chmo14g00649 | Chmo15g00524 | |
| 226190 | Chmo15g00524 | Chmo13g00661 | |
| 238930 | Chmo13g00661 | Chmo15g00524 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr13:30884213 | Chmo15g00524 | Chmo-Chr15:27410449 | wgd | |
| Chmo | Chmo-Chr14:28822671 | Chmo15g00524 | Chmo-Chr15:27410449 | wgd |