Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chmo15g00541	ATGAATGCTTTAAGATTTGGGGTTTATTGTGATCCCATAAACCCTGCTCCTTCAACTTTCAAATCATCAGCAATCTTGATGGACAATCGCAAAAACAATCTTACTTGTATTCGAGCTCAACAGTCTAAGACGACAGATGTGCCTATAATTACTACTTCATCCAATATATCCTTAATTGAAGAACTGAAAAGTAAAGATTGGGAAATTGGAGTTTTAAAAGATGAAATAGCTGCAACTCAGGGAATTCGAATAAGAAGACGGCCTCCAACAGGACCTCCTTTGCATTATGTTGGTCCTTTGGAGCTCCTTTTACAGAATGAAGGGAATACTCCCCGTAACATACTTGAAGAAATTGTATGGAACAAAGATGTAGAGGTTACCCAGATGAAAGAGAGATATCCACTATTTTCGCTAAAAGAGGCTTTCAAAAGTGCTCCTCCTTCAAGGGACTTTGTAGGAGCCCTCACGGCGTCATATTTGCGAACTGGAGTGCCTGGTTTAATTGCTGAAGTGAAAAAGGCTTCACCGAGTAGAGGAGTTCTAAGGGAAGATTTTCACCCTGTTGAAGTTGCAAAAGCCTATGAGAAAGGTGGAGCAGCATGCCTCAGTGTTTTGACTGATTCAAAATACTTTCAGGGGAGCTTCGAGAATCTAGAGGCTATACGGAATGCTGGAGTCAAGTGCCCTCTCTTGTGCAAAGAGTTCATTGTCGATGCATGGCAGCTGTATTATGGGCGAACAAAGGGTGCAGATGCTGTTTTGTTAATTGCAGGCGTCTTACCAGATCTTGACATCAAATACATGCTTAAGATATGCAAAATGATTGGACTGACAGCACTTGTTGAGGTACATGATGAGAACGAAATGGATCGCATGCTGGCAATTGATGGCATTGAGCTCATTGGCATCAACAACCGTAACCTTGAAACATTTGAAGTTGATATTAGTAACACAAAGAAGTTGCTTGAAGGGGAGCGTGGGGAGAAGATCAGACAGAAGGACATAATAGTGGTCGGAGAGTCTGGACTGTTTACTTCTGCAGATATTGCTTATGTACAAGAAGCTGGCGTGAAAGCTATATTGGTCGGGGAGTCAATTGTGAAGCAGAAAGATCCGACACAAGGAATTAGAGAACTTTTTGGAAAAGATATATCAGCTTAG	1161	41.52	MNALRFGVYCDPINPAPSTFKSSAILMDNRKNNLTCIRAQQSKTTDVPIITTSSNISLIEELKSKDWEIGVLKDEIAATQGIRIRRRPPTGPPLHYVGPLELLLQNEGNTPRNILEEIVWNKDVEVTQMKERYPLFSLKEAFKSAPPSRDFVGALTASYLRTGVPGLIAEVKKASPSRGVLREDFHPVEVAKAYEKGGAACLSVLTDSKYFQGSFENLEAIRNAGVKCPLLCKEFIVDAWQLYYGRTKGADAVLLIAGVLPDLDIKYMLKICKMIGLTALVEVHDENEMDRMLAIDGIELIGINNRNLETFEVDISNTKKLLEGERGEKIRQKDIIVVGESGLFTSADIAYVQEAGVKAILVGESIVKQKDPTQGIRELFGKDISA	386

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chmo15g00541	386	Hamap	Indole-3-glycerol phosphate synthase [trpC].	113	381	IPR013798	GO:0004425(InterPro)
	Chmo15g00541	386	FunFam	Indole-3-glycerol phosphate synthase chloroplastic	107	385	-	-
	Chmo15g00541	386	Gene3D	Aldolase class I	107	385	IPR013785	-
	Chmo15g00541	386	CDD	IGPS	151	379	IPR013798	GO:0004425(InterPro)
	Chmo15g00541	386	ProSitePatterns	Indole-3-glycerol phosphate synthase signature.	167	185	IPR001468	GO:0004425(InterPro)\|GO:0006568(InterPro)
	Chmo15g00541	386	SUPERFAMILY	Ribulose-phoshate binding barrel	122	381	IPR011060	-
	Chmo15g00541	386	PANTHER	TRYPTOPHAN BIOSYNTHESIS PROTEIN	59	382	IPR045186	GO:0000162(PANTHER)\|GO:0004425(InterPro)\|GO:0004425(PANTHER)\|GO:0004640(PANTHER)
	Chmo15g00541	386	Pfam	Indole-3-glycerol phosphate synthase	115	379	IPR013798	GO:0004425(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chmo15g00541	K01609	indole-3-glycerol phosphate synthase [EC:4.1.1.48]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	213625	Chmo14g00670	Chmo15g00541
	226197	Chmo15g00541	Chmo13g00681
	238937	Chmo13g00681	Chmo15g00541

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chmo	Chmo-Chr15:28332410	Chmo15g03790	Chmo-Chr15:250875582	dispersed
	Chmo	Chmo-Chr1:111310857	Chmo15g00541	Chmo-Chr15:28332410	wgd
	Chmo	Chmo-Chr13:31937482	Chmo15g00541	Chmo-Chr15:28332410	wgd
	Chmo	Chmo-Chr14:30042495	Chmo15g00541	Chmo-Chr15:28332410	wgd
	Chmo	Chmo-Chr15:28332410	Chmo2g02012	Chmo-Chr2:94301839	wgd
	Chmo	Chmo-Chr15:28332410	Chmo3g02379	Chmo-Chr3:116020986	wgd