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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo15g00598 ATGGCTACAAACATTGTACATGGTGTCTATCCCTCCCACCATCAACTGGTATCACCACAGCAATGTTTCGGTTCAAACAATCGTTCTCAGACGTCCTTGAACTTGAGTATTGTAGCTTCAAATCTGAAGCAGTCGGTTAAGGTGTCAAGGCGTATTAAGGGTCCGAGATCACCTCAAGTTATCCGTACAAGTACTAGAATATGTGCATCACTTGATTTAACTGAAGACAATGTCAAGCTGGTTTTAGATGATGCTAGAACTAAGAAGTTTTCACACCTATTCGATACATCAGTTGGAATGACAGGAGTAGCAGAATTAGCTGAAGTTGATGGACCATTTGTGAAGATTAGACTCAAAGGTCGATTCTGGCATGAACGTTCACTAATATTAGCAAGGCTTGGGAACTACTTGAAGGAACGAATCCCTGAGATACTGGAAGTGGATATAGAAGATGAGAAACAACTAGACGACAGCCCTGAAAATTTTTGA 489 40.9 MATNIVHGVYPSHHQLVSPQQCFGSNNRSQTSLNLSIVASNLKQSVKVSRRIKGPRSPQVIRTSTRICASLDLTEDNVKLVLDDARTKKFSHLFDTSVGMTGVAELAEVDGPFVKIRLKGRFWHERSLILARLGNYLKERIPEILEVDIEDEKQLDDSPENF 162
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chmo15g00598 162 PANTHER OS09G0481800 PROTEIN 33 162 - -
Chmo15g00598 162 Gene3D - 70 149 IPR034904 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo15g00598 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
213640 Chmo14g00714 Chmo15g00598
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chmo Chmo-Chr14:32825949 Chmo15g00598 Chmo-Chr15:31794786 wgd