Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo15g00602 | ATGAGAGAAGAAGGCATGAGCTCGAATGGGGACCCACTTCTTTTCCCCAATTCACCTCCTCCCACTGCTGCTGCTAGTTCTGCTGGGGCATCATCACCAGCTTTTGCCACCAATGCTGGCAGTGCAGATTGGTTGGGTCATGGACAGGGATCTAAAGCAGGTTCTCTATCTCGGATTAGTTCACAGCCAATGTGGATTTCGTTGAGCACAAGTGCTTGTGGTTCAGCTCTTGGCTCGTCCCAACCTTCATGTAGACCATGGGAAAGGGGTGACCTTCTTAGACGACTGTCCACATTCAGGCCTGCAAATTGGTTTGGAAAGCCTAAGGCTGCTAGCTCACTTGCCTGTGCTAGAAGAGGGTGGGTGAATGTGGATGTTGATAAGATTCAGTGTGAGTCTTGTGGTGCAAACCTGAAATACAATGCACCGGATTCACATGCTCATACGGAAGGTGAAAATGGTGAAGAATTTGCCAATCAGCTCGATGAAGGACACAATGTCACATGTCCATGGAGAGGAAACAGCTGTGCAGAAAGTTTAGTGCAGTTCCCACCTACTCCTCCATCAGCCCTTATCGGGGGTTACAAGGACCGTTGTGATGGACTCCTTCAGTTTCCGTATCTACCTGTTGTGGCTGCTTCTGCCATTGAGCAGATGAAGCTTTCTAGAGGTCCAGAAATCGACCGCTTTCTGGTTCAGTCATCTGGTTTTTTAGTAGATGTTGCATCTGATTTGGAGATAAGCTTATATTCACGTGCCCAGAAGTTAATAAGCCTTTGTGGATGGGAGCCGAGGTGGCTTTCAAATGTTCAAGACTGTGAAGAACATTCTGCTCAATCTGCTAGGAATGGGGCTTCTTTCAGTCCAATTAAAGATGACAGAAATCGTAACAAGAAACTTATGTCTGCTTCAACCAAAAAAATTCCTCGGGCCCCATCAAAGTTTGAATCTAGATCACCACTGTTGGATTGCAGCTTATGTGGCGCCACAGTGAGAATCTTGGATTTTATTCGAGTTAATCGTCCAGCTCGTTTTGCTCCTAACAACAGCGATGTTCCTGAAACAAGTAAAAAGATGGCACTTACTCGTGGGGTAAGTGCTGCTAGTGGAATTAGTGGGTGGGTGGCAGATGGTGGTGGGGAGAAAGAGCAAACAGAAGACATTGATGAAGCTGCAACCGCCGGAGACGGGAAGTCGATGTCGAATATTAGGGTTGATTTAAATCTCACAATGGGAAGTGGGTTTCCTACGGGACACGGGAACAAGAGACCAATATCTGAACTATACCAAGAAGTAAATATAGGAACGGATTTAGTCATTGGGCAGCCAGCTGGCAGTGAGGTCGGCGATCGGGCACAATCATTTGAATCCCGAGGTCCTACTACTTTTAAAAGGAACATGGATGAAGGTGGGTCTACTGTCGATAGGCCACAAGGGATAATTCGTCAGGCGGATAGTGTTGAAGGTGTTGTTATTGACCGTGATGGCGATGAAGTAAATGATAGCAAGATGTCCCCGGGGCCATCTAAACGTGCGCGTGAGTCTCATGCCTTTGAACACTTTGAACCATCGTCTGGTGCGGGCCCTAGCCAAACATTGTATTTCGATATTGGAAGGGCGGGTCCTTCAAGTCAAGGCAATGAACTGACGGGCCGAGCTTCATCTGTTATAGCAATGGATACAGTTTGTCGCAGTGACGATAGCAATTCTATGGAAAGTGTTGAAAATCATCCGGGTTTTATTGATGAGGTCAATTACCCATCTGGGTCAGGAGTCAAAAGCCCAGATGTTAATGATAATTCTGATTTAAACGTTAGTATTCAGGCTCAGCAAAGTGTGTGCCCGCCTGCGGTTCATGTCACAGGTGAGATAGGTGTTAGCAGCACCAATGATGAAGAAGTACTGAACACTGATGCTACCACAATTCAAGGGCGGGATGGTCCTAGTTTTGCTATTAGTGGTGGTAGTGTTGGTATGGGTGTGAGTCATGAAGCTGAGATTCATGGCTCTGATGCTTTGATTCATAGGACGGAAAGTGTTGTCGGTGACATGGAACCTGTTACTGGTGTGACGGAAAATCAAGGTCAAACTGGGGAATTTGTTCCGGAGGAAGTGCAACAAGAATGTTCTGGAAGGGCAGATAGTGGGTCAAAGATTGTTGGTTCGGTCAAGGCGGAATCTGTTGAGAGTGGTGACAAGACCAGTGATTTGAATCTTTTGCCACATGAGCAGAGTGATCATCTGGGGCTTTCTTGCAACGCTGTTGTGTTTTCTGGGATTGAAGCTTCAAAGTATGAAGTGACACAGGTGGGGAAGTCGTCTCCTTATGATGAATGTGGCTACCCAAGTTATCCGCCTGTAAACGGTATAGGGCCTCCAAATGGAGAAAGCAACTTTGAAGAAGCAGTTGAGTTGGATCCAATCAAGCATCATAATTTCTTCTGCCCATGGGTGAATGGAAATGTTGCTGTAGCTGGGGTTAGCAACAGCACTAACGGTGCCAGTGCCAGCTCAAGTGTTAGCGGCCTAGCTCTCTGTGGCTGGCAGCTGACTTTGGATGCTTTAGATGGCTTCCAAGGACCTGAACAAAATCAAACTGTGGAATCCGAATCTGCTGCTTCTCTATACAAGGATGAGCATCAAGTTTCTGGTCGAAAACTCATGGCACGAAACTCCTTCAATAGAAGCCATGGCCATAGCTGA | 2703 | 46.76 | MREEGMSSNGDPLLFPNSPPPTAAASSAGASSPAFATNAGSADWLGHGQGSKAGSLSRISSQPMWISLSTSACGSALGSSQPSCRPWERGDLLRRLSTFRPANWFGKPKAASSLACARRGWVNVDVDKIQCESCGANLKYNAPDSHAHTEGENGEEFANQLDEGHNVTCPWRGNSCAESLVQFPPTPPSALIGGYKDRCDGLLQFPYLPVVAASAIEQMKLSRGPEIDRFLVQSSGFLVDVASDLEISLYSRAQKLISLCGWEPRWLSNVQDCEEHSAQSARNGASFSPIKDDRNRNKKLMSASTKKIPRAPSKFESRSPLLDCSLCGATVRILDFIRVNRPARFAPNNSDVPETSKKMALTRGVSAASGISGWVADGGGEKEQTEDIDEAATAGDGKSMSNIRVDLNLTMGSGFPTGHGNKRPISELYQEVNIGTDLVIGQPAGSEVGDRAQSFESRGPTTFKRNMDEGGSTVDRPQGIIRQADSVEGVVIDRDGDEVNDSKMSPGPSKRARESHAFEHFEPSSGAGPSQTLYFDIGRAGPSSQGNELTGRASSVIAMDTVCRSDDSNSMESVENHPGFIDEVNYPSGSGVKSPDVNDNSDLNVSIQAQQSVCPPAVHVTGEIGVSSTNDEEVLNTDATTIQGRDGPSFAISGGSVGMGVSHEAEIHGSDALIHRTESVVGDMEPVTGVTENQGQTGEFVPEEVQQECSGRADSGSKIVGSVKAESVESGDKTSDLNLLPHEQSDHLGLSCNAVVFSGIEASKYEVTQVGKSSPYDECGYPSYPPVNGIGPPNGESNFEEAVELDPIKHHNFFCPWVNGNVAVAGVSNSTNGASASSSVSGLALCGWQLTLDALDGFQGPEQNQTVESESAASLYKDEHQVSGRKLMARNSFNRSHGHS | 900 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo15g00602 | 900 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
| Chmo15g00602 | 900 | MobiDBLite | consensus disorder prediction | 444 | 476 | - | - | |
| Chmo15g00602 | 900 | MobiDBLite | consensus disorder prediction | 281 | 312 | - | - | |
| Chmo15g00602 | 900 | Pfam | C3HC zinc finger-like | 86 | 205 | IPR012935 | GO:0008270(InterPro) | |
| Chmo15g00602 | 900 | PANTHER | NUCLEAR-INTERACTING PARTNER OF ALK | 1 | 898 | - | GO:0005634(PANTHER) | |
| Chmo15g00602 | 900 | MobiDBLite | consensus disorder prediction | 20 | 34 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo15g00602 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 49152 | Chmo15g00602 | Chmo24g04814 | |
| 213644 | Chmo14g00718 | Chmo15g00602 | |
| 226212 | Chmo15g00602 | Chmo13g00729 | |
| 238952 | Chmo13g00729 | Chmo15g00602 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr13:34741626 | Chmo15g00602 | Chmo-Chr15:31878175 | dispersed | |
| Chmo | Chmo-Chr14:32867083 | Chmo15g00602 | Chmo-Chr15:31878175 | dispersed | |
| Chmo | Chmo-Chr15:31878175 | Chmo22g04849 | Chmo-Chr22:293352544 | dispersed | |
| Chmo | Chmo-Chr15:31866788 | Chmo15g00602 | Chmo-Chr15:31878175 | tandem | |
| Chmo | Chmo-Chr14:32871652 | Chmo15g00602 | Chmo-Chr15:31878175 | wgd |