Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo15g00759 | ATGGCCGAAGAATACTCTCTAGCTGATACTTCAAAGCTTCTTCAAGCAGCTTCTGATTTTTCCTTTGATCCTGGTACTCGATCAGAAGCTGCTGTTAAGGAATTTCTTAGCTCTTTTCCCCTTCCTCTTATTATCAATGCTTTGCAAACAAAAGGAGATGTGCCTGGTTTGGAGGACGCACTGATTGATTGTTTAGAGAAGATATTTAGAACAAAATATGGGGCCTCTCTCATCCCACATTTCATGCCTTTCATCGTGGTCGGCCTGCAAGCATACTCTCAGAGAGTCAAAAATTTGTCGTGCAAAACGGTCTCAAGCCTTTTGGAGAATCTTGAAGACAATACTGGCTTAGCTACTTCACTGATCAAAGAGAATGGTGTGTATCCCCTTCTGCTTAATTGTCTCATTGACGGTGATGAACAAGTGGCTGTTGCTGCAACAGAAGCGATCAGAAATTTAGCGCGCTCTCAACAGGGGATAGAGATCATATTCCCGGCTACTCCCGATGAAAGCACAGATATTACAAAGCTAGCAGCAAGATGTTCTTCACTGGGACGAGTACGCGTTTTAGCATTGATAGTGAAACTATTTTCTGCTTCAAGTGCAGCTGCAACATTAGTTCACAACTCAAATCTTCTTGGTCTCTTGGAGGCGGAAGTTCGCAATGCTAATGATACACTTATAACTTTGAGTGTTTTGGAGCTCCTTTATGAGTTGGCTGAGGTCCATCATGGAATGGAATATGTACTTGGGACGAATATCTTGCAGCTACTTATTTCAATAATCAGGAATTCTTCTTCTGAATCAATGTTGAGATCAAGGGCAATGATGATAAGTGGGCGGCTGTTATCGAAAGAGAACGTTTTCACGTTTATAGATGAATCTGGTGTTAAAGCTGTGATTTCAGCTATTGATGAACGGCTTTCATTACTAGATAGTCAAGATGCAGATGAATGTGAATGTGGTCTTGAAGCCTTAGGTCAAATAGGGTCATCAACTAAAGGAGCTGCATTGCTACTTTCAAACACATCTGCTGCTAAACATGTTGTTAACACTGCTTTTAACTTACATGGTCGTGGCAGACAACTGGCAGCATTGCATTCTCTTGGGAACATTGCAGGAGAAACTCTGCCCGAGGAAAACAAGTTGCTGAATGCTGATGCCGAAGAAATCCTTCGTAAATTGGTTTATGAAACAGCATCCAGCACTCCAAAGCTCATACCTTCGGGTCTTGTTCTTGCAATTCTTAAACTCGAGACTGAATTTCGGATCGCGGGTTATAGGTTGATAACAGGATTGGCTGCTAGACCATGGTTTCTGGTGGAAATCTGTTCCAGACAAGAGATAATAAACATATTGACAGATTCATATACGGAAACAACTAAAATAGGGATGGAGGCCAAATTCAACTGTTGTGAGGCGATTTATAAAGCTATTGCATTCTCGCCTAAACTTCTTGGTGATCCAGCTCTTTCTGAGACAGCAGAAAAGCTTTCGGAAGCTATTAAAAAGGGCCCTTATCTTGCCAAAGGACGACAACGTGAAGCACAACCTGAAGTCGCAACTGCTGATAGATTTTAG | 1581 | 41.87 | MAEEYSLADTSKLLQAASDFSFDPGTRSEAAVKEFLSSFPLPLIINALQTKGDVPGLEDALIDCLEKIFRTKYGASLIPHFMPFIVVGLQAYSQRVKNLSCKTVSSLLENLEDNTGLATSLIKENGVYPLLLNCLIDGDEQVAVAATEAIRNLARSQQGIEIIFPATPDESTDITKLAARCSSLGRVRVLALIVKLFSASSAAATLVHNSNLLGLLEAEVRNANDTLITLSVLELLYELAEVHHGMEYVLGTNILQLLISIIRNSSSESMLRSRAMMISGRLLSKENVFTFIDESGVKAVISAIDERLSLLDSQDADECECGLEALGQIGSSTKGAALLLSNTSAAKHVVNTAFNLHGRGRQLAALHSLGNIAGETLPEENKLLNADAEEILRKLVYETASSTPKLIPSGLVLAILKLETEFRIAGYRLITGLAARPWFLVEICSRQEIINILTDSYTETTKIGMEAKFNCCEAIYKAIAFSPKLLGDPALSETAEKLSEAIKKGPYLAKGRQREAQPEVATADRF | 526 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo15g00759 | 526 | PANTHER | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED | 1 | 526 | IPR019538 | GO:0005829(PANTHER)|GO:0043248(InterPro) | |
| Chmo15g00759 | 526 | Pfam | Proteasome non-ATPase 26S subunit | 104 | 521 | IPR019538 | GO:0043248(InterPro) | |
| Chmo15g00759 | 526 | SUPERFAMILY | ARM repeat | 41 | 482 | IPR016024 | - | |
| Chmo15g00759 | 526 | Gene3D | - | 6 | 405 | IPR011989 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo15g00759 | K06692 | 26S proteasome non-ATPase regulatory subunit 5 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 213659 | Chmo14g00841 | Chmo15g00759 | |
| 226256 | Chmo15g00759 | Chmo13g00860 | |
| 238996 | Chmo13g00860 | Chmo15g00759 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr13:44374478 | Chmo15g00759 | Chmo-Chr15:43702179 | wgd | |
| Chmo | Chmo-Chr14:40687557 | Chmo15g00759 | Chmo-Chr15:43702179 | wgd |