Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo15g00797 | ATGATTTCCCCGTCGCTGTTTTCGAACAGTGTTGCGAGGTTTGCGGCGGGGTTTACGGGCTCTGTGACCGCTCTTTCGGCTGTTTGTTTGTTTTACGCTGCGGGGAATATGTTTTATTCATCCGTTGCGCTGCGCTGGGACATGGCGCAACGGATGGTTAATGCGGTACATGACTGGTCTACGGTCAAGACCGTTTTGGATGTCGGGTGTGGCCGGGGGATTCTTTTGAATACGGTCGCGATGCAGCTTAAGAAGGAAGGAAGTTCGGGTCGAGTTGTTGGGTTGGATAGGAAAAACACGACGTTGTCGACTTTAAGGACCGCAGGTATGGAAGGAGTGCAGGAATACGTCACGTGCCGCGAAGGCGACGCGCGACGCCTCCCATTCCCCGACAACTACTTTGACGTGGTTGTATCCGCGACTTTTGTCCACAAAGTGGGCAAAGAATTCGGGACAAAAACCGCGGCAGCATCCGCAGAACGGATGCGCGTGGTAGGCGAGGTAGTCCGAGTACTAAAAGAAGGCGGTGTAGGAGTGGTATGGGACTTGGTACATGTCCCAGAGTATGTACTTCGTTTACAAGAATTAAAAATGGAAGACATAAGAGTGTCGGAAAGAGTAACGGCGTTTATGGTGAATAGTCATATTGTGTCATTTCGTAAGCCCACACAGCACGTGTTGGGCCCCAATGAAGTGAGATTAGATTGGAGATTTAACAATATCTGTTGA | 729 | 50.34 | MISPSLFSNSVARFAAGFTGSVTALSAVCLFYAAGNMFYSSVALRWDMAQRMVNAVHDWSTVKTVLDVGCGRGILLNTVAMQLKKEGSSGRVVGLDRKNTTLSTLRTAGMEGVQEYVTCREGDARRLPFPDNYFDVVVSATFVHKVGKEFGTKTAAASAERMRVVGEVVRVLKEGGVGVVWDLVHVPEYVLRLQELKMEDIRVSERVTAFMVNSHIVSFRKPTQHVLGPNEVRLDWRFNNIC | 242 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo15g00797 | 242 | Pfam | Methyltransferase domain | 66 | 178 | IPR013216 | GO:0008757(InterPro) | |
| Chmo15g00797 | 242 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 39 | 194 | IPR029063 | - | |
| Chmo15g00797 | 242 | Gene3D | Vaccinia Virus protein VP39 | 23 | 221 | IPR029063 | - | |
| Chmo15g00797 | 242 | PANTHER | EXPRESSED PROTEIN | 7 | 237 | - | - | |
| Chmo15g00797 | 242 | CDD | AdoMet-MTases | 64 | 184 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo15g00797 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 49216 | Chmo15g00797 | Chmo16g01092 | |
| 49217 | Chmo15g00797 | Chmo17g01003 | |
| 49218 | Chmo15g00797 | Chmo18g01065 | |
| 213670 | Chmo14g00866 | Chmo15g00797 | |
| 226276 | Chmo15g00797 | Chmo13g00913 | |
| 239016 | Chmo13g00913 | Chmo15g00797 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr13:47663217 | Chmo15g00797 | Chmo-Chr15:45899839 | wgd | |
| Chmo | Chmo-Chr14:42062250 | Chmo15g00797 | Chmo-Chr15:45899839 | wgd | |
| Chmo | Chmo-Chr15:45899839 | Chmo16g01092 | Chmo-Chr16:46629604 | wgd | |
| Chmo | Chmo-Chr15:45899839 | Chmo17g01003 | Chmo-Chr17:42037048 | wgd | |
| Chmo | Chmo-Chr15:45899839 | Chmo18g01065 | Chmo-Chr18:45852853 | wgd |