Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo15g00827 | ATGCAGCAACCAAACAAAACCCTGGAATCAGACCTCCCATCACTCGCCACAATCAAAGTCAAATCATCCTCTCCACGTTTCCGATCAACCACCACTTCATCAACCGACACACCAACCGCCGGAGCCCAGCGTCGTATCGGCATCGCAGTCGACTTATCCGACGAGTCCGCATTCGCTGTCAAATGGGCCGTTCACCAATACCTCCGTCCCGGCGACGCCGTGATCCTAATCCACGTCCGGCCCACTTCCGTCCTTTACGGGGCCGATTGGGGCTCCGTCGATTTAGCACTTTCTGACAACGACCCAGATGAGCAAACTAAAGAGAAGCTGGAAAATGACTTTGATTTGTTCACTAGTAATAAAAGTGCTGATATAGCTGGGCCGTTAGTTGAGGCCGGGATACCGTATAAGATACATATAGTGAAGGATCATGACATGAAGGAGAGATTGTGTTTGGAAGTTGAGAGGTTGGGTTTAAGTGCTGTGATTATGGGGAGTAGGGGAGTTGGGAGGATGAGAAGCGGCGAAGGCGACGGGAGGTTAGGGAGTGTTAGTGATTATTGTGTCAGGCATTGTGTTTGTCCTGTTGTCGTTGTGAGGTTTCCTGATGAGAAAGAGGTTGCTCATGAGGGTGGGGCGGTTGTGAAAGTGGCGAAGGGGGGTGATGACGAGGAGGTGGATGAGGATGAGAGTGAGTTTCATGATGCCAGCGATGAGCGGAAATGGTAA | 729 | 51.03 | MQQPNKTLESDLPSLATIKVKSSSPRFRSTTTSSTDTPTAGAQRRIGIAVDLSDESAFAVKWAVHQYLRPGDAVILIHVRPTSVLYGADWGSVDLALSDNDPDEQTKEKLENDFDLFTSNKSADIAGPLVEAGIPYKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGVGRMRSGEGDGRLGSVSDYCVRHCVCPVVVVRFPDEKEVAHEGGAVVKVAKGGDDEEVDEDESEFHDASDERKW | 242 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo15g00827 | 242 | MobiDBLite | consensus disorder prediction | 216 | 242 | - | - | |
| Chmo15g00827 | 242 | MobiDBLite | consensus disorder prediction | 21 | 42 | - | - | |
| Chmo15g00827 | 242 | PRINTS | Universal stress protein signature | 178 | 200 | IPR006015 | - | |
| Chmo15g00827 | 242 | PRINTS | Universal stress protein signature | 43 | 61 | IPR006015 | - | |
| Chmo15g00827 | 242 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 44 | 202 | - | - | |
| Chmo15g00827 | 242 | MobiDBLite | consensus disorder prediction | 21 | 41 | - | - | |
| Chmo15g00827 | 242 | Pfam | Universal stress protein family | 44 | 200 | IPR006016 | - | |
| Chmo15g00827 | 242 | Gene3D | HUPs | 32 | 210 | IPR014729 | - | |
| Chmo15g00827 | 242 | PANTHER | OS01G0783500 PROTEIN | 6 | 241 | IPR044162 | - | |
| Chmo15g00827 | 242 | CDD | USP-Like | 45 | 199 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo15g00827 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 213683 | Chmo14g00892 | Chmo15g00827 | |
| 226289 | Chmo15g00827 | Chmo13g00940 | |
| 239029 | Chmo13g00940 | Chmo15g00827 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr14:166653685 | Chmo15g00827 | Chmo-Chr15:47115127 | dispersed | |
| Chmo | Chmo-Chr14:301138361 | Chmo15g00827 | Chmo-Chr15:47115127 | dispersed | |
| Chmo | Chmo-Chr15:47115127 | Chmo1g03040 | Chmo-Chr1:175285214 | dispersed | |
| Chmo | Chmo-Chr13:48853475 | Chmo15g00827 | Chmo-Chr15:47115127 | wgd | |
| Chmo | Chmo-Chr14:43136198 | Chmo15g00827 | Chmo-Chr15:47115127 | wgd |