AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo15g00846 ATGGGTGGTGGGGTAGCCATGCGAGCAGCAGCAAAGGTTGCAGGGATGGGTGTCTTAAACACGGGCTTACGTGGATCAGAACACCCAGTCGCCGCCGCAGCGCGTCAAGTCACGCGCACAGTTGCGAGTGCTGCGTCTGATGATTTGAAACTGACGCTTGGTGGTATGAGTGATCATGATAATAATAATTCTGTTGTTGAAAAGGTGGTGGGATATGATCATGACGAAGATTGGGAGTTTGCTGACGTGGTTGATGACTTGTTTGTTGGTGATCATCATCAGTTGCCTAGGTTGGTTTTTGGTGGGGTCCCCAGTTTGCAAGAGGCTAAAGAAGCTGCTTGTGATTTGAATCATGCTCTTGAAATGACATATCTGCATCCAAATGCCACTAATCTGGATGCTGAACATGTGGAGACCAAATCTAGTCTTGTTAGTGAAACATTGGTTGCCCCCTCAGCACCGAAGGGTGCAATTAAAGCCTTTAGGCTTCTTAATGAAAACCCACAGGCTCAGACGGTTGTTGCCTCAATTGCTTCTGATCCTAATGTGTGGAGTGCTGTTATGCAAAATCCTGAACTCGTGGACTTTCTGCAGTCCCATAAGACTGCGTTTGCTCACCCAGATGTGAAAGATGCATCTGGTGATAACTCAGAAGCTGGTGAGTCTGAATCACCACCTGGAAAAGGTTTCATGGAATATGTGGAAGATGTCAAGCAGAAAATAAATGTTACAGTGGAAGATGTCAAGCAGAAAATAAATGTTACAGTTGTCGACATGATGAACACCTTATCAGATACCTTCCAGTCTCTGTTTGGTAGTTCATCTAAAGGCGGATTTGTTATAAATCCAGATGGAACTGCTGCATTAACTGCTGAGAATGTCGCCGTTGGGGCCGGTTTAATGGGTTTGGCTATCATGGTTATCACTGTTGTTGTTCTTAAACGCTCTTAG 951 45.32 MGGGVAMRAAAKVAGMGVLNTGLRGSEHPVAAAARQVTRTVASAASDDLKLTLGGMSDHDNNNSVVEKVVGYDHDEDWEFADVVDDLFVGDHHQLPRLVFGGVPSLQEAKEAACDLNHALEMTYLHPNATNLDAEHVETKSSLVSETLVAPSAPKGAIKAFRLLNENPQAQTVVASIASDPNVWSAVMQNPELVDFLQSHKTAFAHPDVKDASGDNSEAGESESPPGKGFMEYVEDVKQKINVTVEDVKQKINVTVVDMMNTLSDTFQSLFGSSSKGGFVINPDGTAALTAENVAVGAGLMGLAIMVITVVVLKRS 316
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chmo15g00846 316 PANTHER OS08G0179900 PROTEIN 1 316 - -
Chmo15g00846 316 MobiDBLite consensus disorder prediction 207 228 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo15g00846 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
213687 Chmo14g00907 Chmo15g00846
226293 Chmo15g00846 Chmo13g00960
239033 Chmo13g00960 Chmo15g00846
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1494434 Chmo Chmo13g00960 Chmo-Chr13:50173997 Chmo15g00846 Chmo-Chr15:48759327
1500044 Chmo Chmo14g00907 Chmo-Chr14:44830483 Chmo15g00846 Chmo-Chr15:48759327