Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo15g00849 | ATGAGGATAAAAAACAAAAACAAAACTTCGATACTGTTGCCTGAGAAAGTCTCTACCGATCAGATTCCTCAACAGCCAAATTCTTTTGAAGGTGAAAGTCTTCTATATCTTCTCAACTCAATTCAAAGGGAAATTAAGTTAGCGAGACTAAAAGATGAATCTTTACCTCATAAAATTTGGCTAAAGCAACAATTTTCAATTGGCGTAAATGAGGTGACCCGTGTGCTTGAACGGATGCCACCGGTTATCGGATCAGTAATCGCGACTCCACAAAATGCTACTTTTTGCAGTCGTAATTCTGAATCCCCTTCGCTCCAACTTCAGGCAATACTTATAGCAACTGACTGTAATCCTCGAGGGCTAACAAAGCACCTACCAGTCCTTGCCTCTTCTAGGGAGGTGCCCGTTATCTTTGTAAAAGATAAAAAAGGGGGATCTTTCAAATTAGGTGAAATTGTGAATATGAAGACAGCTATGGCAATTGGAGTTAAGGCTAGAGGAAATTCAATCAACAAACTCATAGGCGAGATTCTTGGAGATAAGAATGTAAATAATGGCGTTGTGGTCGTTGAGTGA | 576 | 39.76 | MRIKNKNKTSILLPEKVSTDQIPQQPNSFEGESLLYLLNSIQREIKLARLKDESLPHKIWLKQQFSIGVNEVTRVLERMPPVIGSVIATPQNATFCSRNSESPSLQLQAILIATDCNPRGLTKHLPVLASSREVPVIFVKDKKGGSFKLGEIVNMKTAMAIGVKARGNSINKLIGEILGDKNVNNGVVVVE | 191 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo15g00849 | 191 | Pfam | Ribosomal protein L7Ae-L30e-S12e-Gadd45 family | 107 | 169 | IPR004038 | - | |
| Chmo15g00849 | 191 | Gene3D | - | 41 | 180 | IPR029064 | - | |
| Chmo15g00849 | 191 | PANTHER | OS07G0636400 PROTEIN | 1 | 183 | - | - | |
| Chmo15g00849 | 191 | SUPERFAMILY | L30e-like | 58 | 169 | IPR029064 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo15g00849 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 213688 | Chmo14g00910 | Chmo15g00849 | |
| 226294 | Chmo15g00849 | Chmo13g00963 | |
| 239034 | Chmo13g00963 | Chmo15g00849 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1310375 | Chmo | Chmo15g00849 | Chmo-Chr15:48796717 | Chmo24g01178 | Chmo-Chr24:61972715 | |
| 1494437 | Chmo | Chmo13g00963 | Chmo-Chr13:50220915 | Chmo15g00849 | Chmo-Chr15:48796717 | |
| 1500047 | Chmo | Chmo14g00910 | Chmo-Chr14:44888223 | Chmo15g00849 | Chmo-Chr15:48796717 |