Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo15g00876 | ATGGAGGATATGTTAGTTGCAATTGTATCGATGCTTTTAATTGCGGCGTTAGTTCCGCTTTATTTCTGGAGACGCCGTCAAGTTACTAATGAATCTCTTCATCAACATGAAGAAGAACCTCAGGTTCAGCAGAGAGAAGCTGTTGTAAGGCCTGCCGGTGCTGCTCGTAGTAGGATGCGTAGACGGAATACTTCAGCTGCCAGCACGTCATCTGCTCCACAAGCTGTAGAAGAAACTGAAGATGGAAGCGATGAGGAAGCTGTTGAAGGCGAATATTATAATGCAAAGAATTCAAAGAAGAAAGGCAGAAAGAAAGAGGAGCGCCAGGCAGCACGTCAGGCTGAAGAGGCGGCAAGGGAGTCAAGAAATACAAAACAAGACCGCTATGCAGAAATACGCAGGCGAAAGGATGAGGAACACGAAGCAAAAGAGCGTATGCTGGAGGAAGAAGCTGCGGCTCGAAAGGCCAAGGAGGAGGAAGCTGCAGCATTAGAGTTTGATAAGTGGAAAGGAGAATTTTCGGTAGATGCTGAAGGTACTACAGAAAATGAAGTTCAAGATGGAACCCAGGGTTTGCTTTATGATTTTGTGGAATACATCAAGAAACAGAAGTGTGTCCCCTTGGAAGATCTTGCTGCAGAATTCAAACTACGGACTCAGGATTGTATCAATCGAATCACTTCTTTGGAGGATATGGGGAGATTATCTGGTGTGATGGATGACAGAGGAAAATACATATACATCTCACATGAAGAAATGCAGGCAGTTGCAGACTATATCAAGCGTGAAGGGAGAGTCAGTATTGCCCATCTAGCAAGCCAGTCGAACCAGTTTATAGATTTGGAACCCAAAGCACAGTTTGTTGAGGATTTAAGCACTCAGGATGAAATTACAGTTGCTTAA | 903 | 44.41 | MEDMLVAIVSMLLIAALVPLYFWRRRQVTNESLHQHEEEPQVQQREAVVRPAGAARSRMRRRNTSAASTSSAPQAVEETEDGSDEEAVEGEYYNAKNSKKKGRKKEERQAARQAEEAARESRNTKQDRYAEIRRRKDEEHEAKERMLEEEAAARKAKEEEAAALEFDKWKGEFSVDAEGTTENEVQDGTQGLLYDFVEYIKKQKCVPLEDLAAEFKLRTQDCINRITSLEDMGRLSGVMDDRGKYIYISHEEMQAVADYIKREGRVSIAHLASQSNQFIDLEPKAQFVEDLSTQDEITVA | 300 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo15g00876 | 300 | MobiDBLite | consensus disorder prediction | 61 | 77 | - | - | |
| Chmo15g00876 | 300 | Coils | Coil | 97 | 124 | - | - | |
| Chmo15g00876 | 300 | Gene3D | - | 191 | 248 | IPR036388 | - | |
| Chmo15g00876 | 300 | SUPERFAMILY | Winged helix DNA-binding domain | 187 | 256 | IPR036390 | - | |
| Chmo15g00876 | 300 | MobiDBLite | consensus disorder prediction | 107 | 158 | - | - | |
| Chmo15g00876 | 300 | Pfam | DDRGK domain | 95 | 280 | IPR019153 | - | |
| Chmo15g00876 | 300 | SMART | DDRGK-2 | 95 | 280 | IPR019153 | - | |
| Chmo15g00876 | 300 | MobiDBLite | consensus disorder prediction | 33 | 158 | - | - | |
| Chmo15g00876 | 300 | FunFam | DDRGK domain-containing protein 1 | 191 | 248 | - | - | |
| Chmo15g00876 | 300 | Coils | Coil | 129 | 167 | - | - | |
| Chmo15g00876 | 300 | PANTHER | DDRGK DOMAIN-CONTAINING PROTEIN 1 | 43 | 295 | IPR050899 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo15g00876 | K23344 | DDRGK domain-containing protein 1 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 213699 | Chmo14g00941 | Chmo15g00876 | |
| 226306 | Chmo15g00876 | Chmo13g01001 | |
| 239046 | Chmo13g01001 | Chmo15g00876 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1310398 | Chmo | Chmo15g00876 | Chmo-Chr15:50576089 | Chmo9g04147 | Chmo-Chr9:234108019 | |
| 1494454 | Chmo | Chmo13g01001 | Chmo-Chr13:52369179 | Chmo15g00876 | Chmo-Chr15:50576089 | |
| 1500061 | Chmo | Chmo14g00941 | Chmo-Chr14:46799030 | Chmo15g00876 | Chmo-Chr15:50576089 |