Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chmo15g00888	ATGTTTCCTGTTGTTGGAAGTGGCAAGTTCATCACTGCACGCGTGATCACAGCAAATGGTGATCCAATCCAGGACCCAACAGTGCTTCTAGGAACAGATCTTGAACAGCTTCCAACACCGGAATCTCAAGAAAGTGCTGATCTGATTCCAGTCACAGTGGGTTCTCGAGAGCATGATAAAGAAATAATTCAGTGGAAGCTTGCTCTACATCAAATAGGTCTGGATGTAGTTCGCACGGACAGGACGTTAATGTTTTATGAGAAGCAAGAGAATCTGGCAAAACTTTGGGATGTTCTTGCTGTCTATGCTTGGCATGATAAAGACGTTGGTTATGGCCAAGGTATGAGTGATCTTTGCTCTCCCATGATTATGCTTCTAGAAAATGAAGCAGATGCATTTTGGTGCTTTGAACGTTTAATGCGTAGAGTGCGAGGGAATTTCAGGTGCACAGGGAACTCGGTGGGGGTAGAGGCACAGCTTGAAAACTTGGCTAATGTCACTAAAGTTGTTTATCCTAAACTTCACCAGCATTTAGAACACCTTGGTGGAGGTGGTTACCTGTTTGCGTTTCGGATGCTAATGGTTTTGTTCCGGCGAGAATATTCCTTTGGAGATTCATTAGTCTTGTGGGAGATGATGTGGGCTTTAGAGTATGATCCAGAACTATTCTCATTATACGAAGGAGATGAAACACAAAACAAATATGATGTTTACAAAGCAACCCGAAAATCCAGACGCCAGTATGGCAAGTACGTAAGAGCAAACAGAAGAAGTAGGGCCCGTGCCAGAGGAGAAACTTCCGCACCACTACCTATTTCTGTTTTCGTTCTAGCAAGTGTCCTCAAGGACAGGAGTGACAAGTTATTAAAAGAAGCTAGGGGACTAGATGACGTTGTAAAGATATTGAATGACATCTCTGGAAATATGGATGCCAAGAAAGCTTGCACAGGGGCCATGAAGATTCACAAGAAGTATTTAAAAAGGCAAAAACGGCAAAGCATTCAGTGA	1008	43.15	MFPVVGSGKFITARVITANGDPIQDPTVLLGTDLEQLPTPESQESADLIPVTVGSREHDKEIIQWKLALHQIGLDVVRTDRTLMFYEKQENLAKLWDVLAVYAWHDKDVGYGQGMSDLCSPMIMLLENEADAFWCFERLMRRVRGNFRCTGNSVGVEAQLENLANVTKVVYPKLHQHLEHLGGGGYLFAFRMLMVLFRREYSFGDSLVLWEMMWALEYDPELFSLYEGDETQNKYDVYKATRKSRRQYGKYVRANRRSRARARGETSAPLPISVFVLASVLKDRSDKLLKEARGLDDVVKILNDISGNMDAKKACTGAMKIHKKYLKRQKRQSIQ	335

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chmo15g00888	335	SUPERFAMILY	Ypt-Rab-GAP domain of gyp1p	60	177	IPR035969	-
	Chmo15g00888	335	FunFam	TBC1 domain family member 15-like	51	147	-	-
	Chmo15g00888	335	Gene3D	-	153	334	-	-
	Chmo15g00888	335	ProSiteProfiles	TBC-rab GAP domain profile.	55	217	IPR000195	-
	Chmo15g00888	335	SUPERFAMILY	Ypt-Rab-GAP domain of gyp1p	155	325	IPR035969	-
	Chmo15g00888	335	PANTHER	TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN	64	306	-	GO:0005096(PANTHER)\|GO:0090630(PANTHER)
	Chmo15g00888	335	Pfam	Rab-GTPase-TBC domain	56	218	IPR000195	-
	Chmo15g00888	335	SMART	tbc-4	17	242	IPR000195	-
	Chmo15g00888	335	Gene3D	putative rabgap domain of human tbc1 domain family member 14 like domains	55	147	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chmo15g00888	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	49245	Chmo15g00888	Chmo22g05177
	49246	Chmo15g00888	Chmo23g05138
	49247	Chmo15g00888	Chmo24g05199
	213704	Chmo14g00947	Chmo15g00888
	226310	Chmo15g00888	Chmo13g01006
	239050	Chmo13g01006	Chmo15g00888

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	1310406	Chmo	Chmo15g00888	Chmo-Chr15:50946217	Chmo2g03497	Chmo-Chr2:216920388
	1494457	Chmo	Chmo13g01006	Chmo-Chr13:52551618	Chmo15g00888	Chmo-Chr15:50946217
	1500065	Chmo	Chmo14g00947	Chmo-Chr14:47002360	Chmo15g00888	Chmo-Chr15:50946217
	1503506	Chmo	Chmo15g00888	Chmo-Chr15:50946217	Chmo22g05177	Chmo-Chr22:305293952
	1503709	Chmo	Chmo15g00888	Chmo-Chr15:50946217	Chmo23g05138	Chmo-Chr23:299919623
	1503821	Chmo	Chmo15g00888	Chmo-Chr15:50946217	Chmo24g05199	Chmo-Chr24:302072881