AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo15g00898 | ATGGCTCAAACACTGGAAGCCATCAAGGGTGGTGGTGGATCCATCAAAGTTGGAACCACCGGCACCATCAATGCCTTAATGTCAAGGGAACTACAATCGATCAAAGTTGCATCTCCAAGGGCAGTCCCATTGACACTCAAATCTCCAAAACGAGCCGTGGAACCTAATGAGGCTACTACGAGTACAACTCCTAAATCAAGTGTACAATCAGATGAAGCAAGCACTAGCAGCAGCGGTAATACAATGACTGAAAAACACACCAGTGTTCCTCATAAAACCAAGCACTATCATGCTAGAAGAGATAGTCGAAATCCTTTTCTTCGTTCTGATAGTGCATCAGTTGATGGAAATGGAACTCCTAATCGTAGGAAGAATGATAAGAAGGGGTCTTGCATGGTTGAAATAGTGGACGTGAAATGTGGAGTTCCTGATAAAATGTGGGCGAATCCCATAACTAATAAGCTGAAGAAATTCACTTTCTCGAAGCTCTCTGAAACCAATGGCGTTAAGTAA | 513 | 43.08 | MAQTLEAIKGGGGSIKVGTTGTINALMSRELQSIKVASPRAVPLTLKSPKRAVEPNEATTSTTPKSSVQSDEASTSSSGNTMTEKHTSVPHKTKHYHARRDSRNPFLRSDSASVDGNGTPNRRKNDKKGSCMVEIVDVKCGVPDKMWANPITNKLKKFTFSKLSETNGVK | 170 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo15g00898 | 170 | PANTHER | BNAA10G09140D PROTEIN | 1 | 167 | - | - | |
| Chmo15g00898 | 170 | MobiDBLite | consensus disorder prediction | 54 | 86 | - | - | |
| Chmo15g00898 | 170 | MobiDBLite | consensus disorder prediction | 37 | 130 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo15g00898 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 49260 | Chmo15g00898 | Chmo22g05195 | |
| 49261 | Chmo15g00898 | Chmo23g05153 | |
| 49262 | Chmo15g00898 | Chmo24g05219 | |
| 213710 | Chmo14g00963 | Chmo15g00898 | |
| 226317 | Chmo15g00898 | Chmo13g01021 | |
| 239057 | Chmo13g01021 | Chmo15g00898 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1310416 | Chmo | Chmo15g00898 | Chmo-Chr15:51535205 | Chmo1g02133 | Chmo-Chr1:106051756 | |
| 1494465 | Chmo | Chmo13g01021 | Chmo-Chr13:53425245 | Chmo15g00898 | Chmo-Chr15:51535205 | |
| 1500073 | Chmo | Chmo14g00963 | Chmo-Chr14:47767506 | Chmo15g00898 | Chmo-Chr15:51535205 | |
| 1502935 | Chmo | Chmo15g00898 | Chmo-Chr15:51535205 | Chmo18g00992 | Chmo-Chr18:42695243 | |
| 1503510 | Chmo | Chmo15g00898 | Chmo-Chr15:51535205 | Chmo22g05195 | Chmo-Chr22:306016541 | |
| 1503713 | Chmo | Chmo15g00898 | Chmo-Chr15:51535205 | Chmo23g05153 | Chmo-Chr23:300660870 | |
| 1503825 | Chmo | Chmo15g00898 | Chmo-Chr15:51535205 | Chmo24g05219 | Chmo-Chr24:302983308 |