Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo15g00899 | ATGGATGCTGAATTTGAAACCATTGAGGCACGATTGCAATCTTTCATTAGTCAATTCCAGTCAGAAGTAGGCGTGCTTGATAGAATCGTCCACAAATATAAGAACCAGCATCGCAGAAGCTCATATTTTCAATACTTGTTGAAGGTGAGGAGAGACTGTAAGCTTCTTCAGTCAACTAACTTGGTGGAACTTGTGAACTCGTCGTTTCTTGTCATTAATGGAAATCGACCTAAGCAAAAGGTGCAGCTTTTGGAAAGTTTGAAGAGAAGAAAATGTGATGGAGGCAAACATAATTTTCTGGGGCGAATTCAGGGTGCCGCACGTCTACTTTCACAGATGGTTGAGCCGATGCTTAAGGCAGCTATAGAGATATCTACCTTGCTTGCTCGATCCTTTTTTATGGGATTTTCTATGACTGTGCTGGCTCTGCTGGCACGCCTTCGAGTTTTGACACAACAAATATTACTTGATGTTGTGTCCGCATTCAACATGGTTTCCTCTCTATCTCGTAAACAGCAGTCCATCAAACTGAACCAAGAAGGAATCGAGGTTTTTAGAGAGTATTACCCAACAAATGAGCACACTGTCTTTTTGGAGTGTGTGTGGGAAACTGATAAATTCATTTTACTTGAGAGGAAGAGTGAACCCGAGAACAAAAATCCAGATACCATAAAGGAAGATTTCATATGTCGAGGTTCATCTACAGTAGAGTATCAAAGCGTCGAAACTATTCTTGGAGAGCATAAACCCATGGATGCTGTAATGGAGAAGTCTTCTGAAGAAGACGTTACTACCATCAAAATAGACAATTTTTCATCACTGGATGGTATTACTAATGATCGCAAGCAAGTTGAAGCACCAAACAATGCCAAAGACCGGTCGGGTTTATCTCAGTCTTCCAGCAAGAACCTAGAACACGAACATCTTATATGGGTTCAGATTTGGCGGTTTCATCAAGTCCCCCCAAATCTAAACCCGGATCGAAAAAGAAAGTGGCCTTCATATCTGTGA | 1011 | 41.35 | MDAEFETIEARLQSFISQFQSEVGVLDRIVHKYKNQHRRSSYFQYLLKVRRDCKLLQSTNLVELVNSSFLVINGNRPKQKVQLLESLKRRKCDGGKHNFLGRIQGAARLLSQMVEPMLKAAIEISTLLARSFFMGFSMTVLALLARLRVLTQQILLDVVSAFNMVSSLSRKQQSIKLNQEGIEVFREYYPTNEHTVFLECVWETDKFILLERKSEPENKNPDTIKEDFICRGSSTVEYQSVETILGEHKPMDAVMEKSSEEDVTTIKIDNFSSLDGITNDRKQVEAPNNAKDRSGLSQSSSKNLEHEHLIWVQIWRFHQVPPNLNPDRKRKWPSYL | 336 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo15g00899 | 336 | PANTHER | OS09G0504900 PROTEIN | 4 | 311 | - | - | |
| Chmo15g00899 | 336 | Pfam | Nucleolus and neural progenitor protein, N-terminal | 4 | 163 | IPR027951 | - | |
| Chmo15g00899 | 336 | MobiDBLite | consensus disorder prediction | 278 | 301 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo15g00899 | K27075 | nucleolus and neural progenitor protein |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 213711 | Chmo14g00964 | Chmo15g00899 | |
| 226318 | Chmo15g00899 | Chmo13g01022 | |
| 239058 | Chmo13g01022 | Chmo15g00899 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1310417 | Chmo | Chmo15g00899 | Chmo-Chr15:51538476 | Chmo21g02861 | Chmo-Chr21:181551692 | |
| 1460727 | Chmo | Chmo21g02862 | Chmo-Chr21:181553525 | Chmo15g00899 | Chmo-Chr15:51538476 | |
| 1494466 | Chmo | Chmo13g01022 | Chmo-Chr13:53427983 | Chmo15g00899 | Chmo-Chr15:51538476 | |
| 1500074 | Chmo | Chmo14g00964 | Chmo-Chr14:47770570 | Chmo15g00899 | Chmo-Chr15:51538476 |