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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo15g00903 ATGACGGTCTACATGAACCGCTTATTCCGGAAATCAAACTCCTCATTTCTGTTATCATCAGGCAAAGCCATAACATCCAAAGTCACACGTCTTAAAGATGACAACACTTTTTTAATCTCAACTGGTATCACCCCACCAAAAATCACACCATCTGACCAGTTGTTACTACCCAAAAACAGTGACGTCACTAGCTTCTACAACAATGTTGGGTTTATGCAACCTTCTTCGAATGAATCTCTGCCCAAGACCCAGATGCTGGAAAGGCTTTTTATGGACTTAGTTGCAGGTGATGATAGTATTAAGGAACGTGCATTGGGTCGGTTTAATGATATTGTTGGTGGGAGTATGGAGACTGTTCCTGGTGAAGCGAGTATTTTGATGCCGAGGAGGTTTAGGCAGTTTCAGGCGTGGAATGAATTGAAGAAGATATGGCAAGGGAATAAGAAGGTGAAGGGGTTCTTGATGGAGAAAGTTAGGGGTGGGTATAGTGTTGCGATTGCGGGATATATTGCGTTTGTTCCATTTAGGCCGTATGTTGAACGGAGGAATTTGGGGAGTGATAAGTTTACTGTTGAGTCGATTAACTCTAAAAGGAAGAAGATTACTGTGTTTTGA 615 42.11 MTVYMNRLFRKSNSSFLLSSGKAITSKVTRLKDDNTFLISTGITPPKITPSDQLLLPKNSDVTSFYNNVGFMQPSSNESLPKTQMLERLFMDLVAGDDSIKERALGRFNDIVGGSMETVPGEASILMPRRFRQFQAWNELKKIWQGNKKVKGFLMEKVRGGYSVAIAGYIAFVPFRPYVERRNLGSDKFTVESINSKRKKITVF 204
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo15g00903 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
213713 Chmo14g00970 Chmo15g00903
226320 Chmo15g00903 Chmo13g01033
239060 Chmo13g01033 Chmo15g00903
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1310421 Chmo Chmo15g00903 Chmo-Chr15:52469653 Chmo7g02309 Chmo-Chr7:159683982
1466783 Chmo Chmo7g02307 Chmo-Chr7:159677411 Chmo15g00903 Chmo-Chr15:52469653
1494469 Chmo Chmo13g01033 Chmo-Chr13:53837583 Chmo15g00903 Chmo-Chr15:52469653
1500078 Chmo Chmo14g00970 Chmo-Chr14:48387033 Chmo15g00903 Chmo-Chr15:52469653