AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo15g00913 ATGGACCCAATGAACCAAGAAGTAAGTCCCGATGCCTCACTAACTGCTCCGGAAAAGCGAAAACGTGGTCGCCCACGAAAAGATCCAAGTGAAAGACGAGCACAAAAAGCTCGTTCACGTGCTGCTGCTGACATGTCACCTGGCTTTGTACAGTCGACCAGCAAACCTAAGAGAGTTGATCCAATCAATGACCCAACTGAAGTCATAATCGGACAGGTCGTCACTGGTGTTGTCGAGGCAACTTTTGATGCTGGTTTCCTACTTGCTGTTAGGATCGGGAACTCAAAGATCACACTAAGAGGCGCGGTTTTCAAACCAGGACAAGCTGCTCCTGTGACGCCAGAAAATGACGTGGCACCTAATGCTGAAATGATCAAACGAACTGAAGTTCCTTTCCCATCAGAACTTCAACCTAAACGCAGGCGTAGACGATCAAAAGAAAAAAGCATGCAGCTTGTTACATATACCGGGAACGATAATAATTCACCAACAAAAGGAAACTATGCTTTATCCCCATCAGTTCCGCAAGTTGGTGCGAGAGGCACCGTGGTCCCAGTTGTTCTCCAACCGATCAACTTATCAAACGGTTTATCAACCAATCAACCCGCTCCTCATTTGCGGACCACACAAGGGAAGCCGGTGCACTCGGTTTTGCCGTTGGCGGTTTACCCGCCGAATGGTTCAATGGGTCATGCATCTGAGTCTCAAACTAGCTCACAGTTTACTGTTACACCCACTGGGTCCGGAAATGAAAATGCTTCTTTTAAACAAGGTGATGGGGGTAATCAGCCAATAAAAGCAACTGATGGAATTGTGAAAATGGAATCAGACATTGGTGATATGAACGAGCCTCTTTTTATTGAACCTTTGCAAACTCGACACACGGTTCATCATTTTCAGTCTCCACCGGGATTGGGACCTATGATGCACAGTGGACCCGGAAAAATGACAGAGCTTTTGCAGGCTGTTCAGCAGAATGTTGGTGACGAACAGGGCCCTCTAAATGGACATCAAAATGCAGGTTATAATGTAGGTCTTAACAGAGATGAAGAAACTGGTCAGTCAGGGAAGATGTAA 1077 46.43 MDPMNQEVSPDASLTAPEKRKRGRPRKDPSERRAQKARSRAAADMSPGFVQSTSKPKRVDPINDPTEVIIGQVVTGVVEATFDAGFLLAVRIGNSKITLRGAVFKPGQAAPVTPENDVAPNAEMIKRTEVPFPSELQPKRRRRRSKEKSMQLVTYTGNDNNSPTKGNYALSPSVPQVGARGTVVPVVLQPINLSNGLSTNQPAPHLRTTQGKPVHSVLPLAVYPPNGSMGHASESQTSSQFTVTPTGSGNENASFKQGDGGNQPIKATDGIVKMESDIGDMNEPLFIEPLQTRHTVHHFQSPPGLGPMMHSGPGKMTELLQAVQQNVGDEQGPLNGHQNAGYNVGLNRDEETGQSGKM 358
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chmo15g00913 358 MobiDBLite consensus disorder prediction 150 165 - -
Chmo15g00913 358 MobiDBLite consensus disorder prediction 1 61 - -
Chmo15g00913 358 MobiDBLite consensus disorder prediction 226 265 - -
Chmo15g00913 358 MobiDBLite consensus disorder prediction 229 261 - -
Chmo15g00913 358 MobiDBLite consensus disorder prediction 129 165 - -
Chmo15g00913 358 PANTHER AT HOOK MOTIF-CONTAINING PROTEIN 1 331 IPR045881 -
Chmo15g00913 358 MobiDBLite consensus disorder prediction 14 39 - -
Chmo15g00913 358 MobiDBLite consensus disorder prediction 329 358 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo15g00913 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
213719 Chmo14g00982 Chmo15g00913
226326 Chmo15g00913 Chmo13g01043
239066 Chmo13g01043 Chmo15g00913
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1494478 Chmo Chmo13g01043 Chmo-Chr13:54005047 Chmo15g00913 Chmo-Chr15:52578991
1500087 Chmo Chmo14g00982 Chmo-Chr14:48574954 Chmo15g00913 Chmo-Chr15:52578991