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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo15g00915 ATGGCTGATTTTGAAGCACCTTCATTCTCTTTAGGTTTTGATTTTGATTCAGAAGATGATAGTATTAAAAACCTAATTGTCGATGATTCGGATCCTGAATATCATCCGGACCCGAAGCGTATCCGGCGTCGGGTCATTGACAATGACACGTCATCATCATTTGTTCCCGTTGTGGAGTTGCGTACAGATGAAAAACTTCATAGACACGAGAGTGCTGAGTGTACTAGTTCAATGTTCCAACCAGATAGACTAAAAGAAAATGTTTTGAATACTCGGGGAGCGGTCTCAACAAGCTCCATAGATATTGATAAGTCTCTTCCCTACGCACATCATTATTTTTTCCACGATGATAGAAGGATACAGGAGCTTGTCCGAATTCGCCTACCTTATTTTTCCCCTTTGGATGACCTGTCAAATAGTGACCTTGAGCAGCTGAGTACATCAAATATCGATTACATGGGCCAATTTAGGTGTGGTGAAAGCTTAAAACAAGATTCTAGAAATATTAAGGGGATGAAAAGCTCAAATAGTAGGAAGAATTCAAGAAAATTAAAGAATGAAGATACGTCGGAAGGTTGGGTGAATCCGAAGGCTGGTGTTGATAGAGTGACGACAAAAAGAGCTGTGAATAAAATGGGTCATTCAGCCCATCAAAATTCGGGGCATTGGATAACTGGCCCGGATGGAAAGAAAGTCTATGTTGGTAAAAAAGGTCAGGAGCTGACCGGCCGAGTTGCATACATGCAGTACAAAAAGGAGAATGGTTTAGGATTCAAAAAGAAGAAGAAATGA 792 40.66 MADFEAPSFSLGFDFDSEDDSIKNLIVDDSDPEYHPDPKRIRRRVIDNDTSSSFVPVVELRTDEKLHRHESAECTSSMFQPDRLKENVLNTRGAVSTSSIDIDKSLPYAHHYFFHDDRRIQELVRIRLPYFSPLDDLSNSDLEQLSTSNIDYMGQFRCGESLKQDSRNIKGMKSSNSRKNSRKLKNEDTSEGWVNPKAGVDRVTTKRAVNKMGHSAHQNSGHWITGPDGKKVYVGKKGQELTGRVAYMQYKKENGLGFKKKKK 263
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chmo15g00915 263 MobiDBLite consensus disorder prediction 163 196 - -
Chmo15g00915 263 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 48 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo15g00915 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
213721 Chmo14g00985 Chmo15g00915
226328 Chmo15g00915 Chmo13g01045
239068 Chmo13g01045 Chmo15g00915
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1310430 Chmo Chmo15g00915 Chmo-Chr15:52921766 Chmo17g04945 Chmo-Chr17:309763412
1494480 Chmo Chmo13g01045 Chmo-Chr13:54058092 Chmo15g00915 Chmo-Chr15:52921766
1500089 Chmo Chmo14g00985 Chmo-Chr14:48644527 Chmo15g00915 Chmo-Chr15:52921766