AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo15g00928 ATGGATAAAGGAAAACGTTCGGAACCGATACAGAAATCCGTTAAAAATAACGATTTTAATCACAGTTCCAAAAACCCTAACAAGATTTATTCTAATCATTCACTGCACTCATCTTGGTCACCCTTAAAGAAAAGAAAGCCTCCTGCTTTGGTAAGCTTGTGTCTTGGAATCATAGGCAAACATCTCGAGGATATCATTCATGATTTAGACGTTTTAACAACTTTTCCGCCAGATATAAAGATGGCTATAGCAGCCATTGCAAGAAGAAGAAAGTTGCTAAATGATGATGTGATCGTTGCATTGGCAGAGAGCTCGTGGGAAATTCTTGATTTGTCGGATTCGGAAGTCTCTGATATTGGCTTGTCAAAGGTGATCGAGATTTGCAGAAATGTGAGAGCCGTGCACATAAGTCGTTGCAGCAAAATCACATCATTTGGTGTTTCGGAACTTGTGAAGCATTGTCTTTGTCTTGAAATATTGAGATGGGGAGGATGTCCAAGGAGTGAACACACTGCGCGCAGCTCTATAAACATCTTGAAACCAACATTGAATGATGTTGATGGGGATTCATGGGAGGAACTTGATGCCACAGAAATCGTACATGGAGCACAGTCATTACGTTGGCTCGTATGGCCAAAAGTTGATAAAGATTCGTGGGAGACTCTATCAACAGAATGCCCACGTATTATAGTGAATCCTAAACCATCACTCTTTGGCCACAAAGGGATTGATATCCCTAGGCATGCATTACCTGGTATAGCTTTGGATGATTTTATTGTGGAAGAAATTGACCCAAACACTTGGGTAGTTCCAGGATCTAGGCTTAAGACAACTTCACCTTCTTTGAACTCAGTTGAATTGCCAATTGCTGAGAGATTTAGACTTGCATTTGTTGAAAGAGATGCTAGATTAGCACCAAAACGGGCTAAAAATGCTAGACAGAGACAACGAAGGGCAGAGCAAGAGTGGGTAACAACAAGTACCAGTGCAAAGTCAGCTGCGCTTGCAGCGCAGATGAGCAAAAATTTACGCATTTAG 1038 41.33 MDKGKRSEPIQKSVKNNDFNHSSKNPNKIYSNHSLHSSWSPLKKRKPPALVSLCLGIIGKHLEDIIHDLDVLTTFPPDIKMAIAAIARRRKLLNDDVIVALAESSWEILDLSDSEVSDIGLSKVIEICRNVRAVHISRCSKITSFGVSELVKHCLCLEILRWGGCPRSEHTARSSINILKPTLNDVDGDSWEELDATEIVHGAQSLRWLVWPKVDKDSWETLSTECPRIIVNPKPSLFGHKGIDIPRHALPGIALDDFIVEEIDPNTWVVPGSRLKTTSPSLNSVELPIAERFRLAFVERDARLAPKRAKNARQRQRRAEQEWVTTSTSAKSAALAAQMSKNLRI 345
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chmo15g00928 345 Gene3D Ribonuclease Inhibitor 33 233 IPR032675 -
Chmo15g00928 345 MobiDBLite consensus disorder prediction 13 27 - -
Chmo15g00928 345 MobiDBLite consensus disorder prediction 1 27 - -
Chmo15g00928 345 SUPERFAMILY RNI-like 104 176 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo15g00928 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
213725 Chmo14g00998 Chmo15g00928
226332 Chmo15g00928 Chmo13g01055
239072 Chmo13g01055 Chmo15g00928
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chmo Chmo-Chr13:54318784 Chmo15g00928 Chmo-Chr15:53252211 wgd
Chmo Chmo-Chr14:49288385 Chmo15g00928 Chmo-Chr15:53252211 wgd