Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo15g00929 | ATGGATGACGAATATGGTATGTACAGAAGAGGAAGCAGTGGATGGTCATCCATGATTGGAATTGAAGAACTTCAAGAAACTGATGTTTGGTCTGTTTATAATGGAAGAAATGATTTCGACTCAAAATCTTTGAAGTCAAAGTCAAAAGGAGGATCATCTTCTAGTCTGACTTCAAGAACCAACTCTTTATCAAGTGCAGCCAGAATGATTCCTAGGCATAGTACCACCAATCCTGACACAGAATCTCGGATTCCTCGAAGACAATCAGCACCTGTCAAAGTTCCTGATTGGTCCAAAATCTATGGAAAGTCAAACAGATCATCACAAAATTCTGCATTTCTTGATTATGGTAATGATTACGGTCATGATTATGATGATGATAATGATGGTGATGATGATGTGGGCATGATGCCTCCACATGAATGGATTGCACAGAAGTATGCCAGGAGTCAAATTTCATCGTTTTCGGTCTGTGAAGGCGCGGGAAGAACGCTTAAAGGCAGAGATCTCAGTAGGGTAAGAAATGCTGTCTTGACGAAAACTGGTTTTCTTGAATAA | 558 | 39.96 | MDDEYGMYRRGSSGWSSMIGIEELQETDVWSVYNGRNDFDSKSLKSKSKGGSSSSLTSRTNSLSSAARMIPRHSTTNPDTESRIPRRQSAPVKVPDWSKIYGKSNRSSQNSAFLDYGNDYGHDYDDDNDGDDDVGMMPPHEWIAQKYARSQISSFSVCEGAGRTLKGRDLSRVRNAVLTKTGFLE | 185 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo15g00929 | 185 | Pfam | Senescence regulator | 22 | 185 | IPR007608 | - | |
| Chmo15g00929 | 185 | MobiDBLite | consensus disorder prediction | 38 | 108 | - | - | |
| Chmo15g00929 | 185 | MobiDBLite | consensus disorder prediction | 46 | 84 | - | - | |
| Chmo15g00929 | 185 | PANTHER | EMB|CAB72159.1 | 19 | 184 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo15g00929 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 213726 | Chmo14g00999 | Chmo15g00929 | |
| 226333 | Chmo15g00929 | Chmo13g01056 | |
| 239073 | Chmo13g01056 | Chmo15g00929 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr13:325133290 | Chmo15g00929 | Chmo-Chr15:53257634 | dispersed | |
| Chmo | Chmo-Chr14:307206956 | Chmo15g00929 | Chmo-Chr15:53257634 | dispersed | |
| Chmo | Chmo-Chr15:53257634 | Chmo15g04866 | Chmo-Chr15:298347293 | dispersed | |
| Chmo | Chmo-Chr13:54325931 | Chmo15g00929 | Chmo-Chr15:53257634 | wgd | |
| Chmo | Chmo-Chr14:49294669 | Chmo15g00929 | Chmo-Chr15:53257634 | wgd |