AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chmo15g01072 ATGCAAAGACACCGTAACCAATCTAACGGATTCCGTTCAAACGGTCCGGTGTACCGGAATTACAACAACCGTGGCGGCGGCGGCGGTGGTGGTTACCGGGGCCCACCGCCGCCACGTAGGGTTGATGTTTTTATGGAAGCTGGTAGGTTAGCTACTCAGTATTTACTGGCTAAAGGTTTACTTAATAATAATAATAATAAAGGGCAAAATAATTATAGTACTAATAATAATGATGTTAATGATGTTAAGAGTCCGGTTGTTGTTTCGGATTTACGAGATGAGAATAAGGTTGTTAGGAGGAGTGTTAAGGATCCTAGAATTGAGTTGAGTAATAATGAGATTAGTAAGGATTCAGAGAAAATAGGTGAGGGCGATGAGGCGGTTTTAGGTGGTGAGGAGGTAAAACCGGTGGTGTCGGGTGATTTGGAATTAAGGAATGTGGAGACGAAGGTTGAGAATGAAGAGAAGGAATTGCGTGATGAGGATGTGGGCGTTGAGGCGCCGGTTTTGGAAGTTACGAAGATGGAAGGTGTCGAGTCCGAGGAGAAAAGTGATGATGTTAAGAATGTAGATGTGAAGACGGAGGAGGATGTGATGATGGATGATGATGATAAAAAGGATGAGAAGACGGTTGTTGAAGAAGACGTTATGGAAGAGAATGAGAATGATAATGGGAATGGGAATGGGAATGGGAAGGATAGTGGTAGTGATTTGCTGACGTTGATTAGGGATGATAATGTACCGACTAGGACTCGTTCTTCTCTGACTCTTAAGGGGTCTAAAAGTGATCCGGTATTGATATCCGGAGATGAAAATAGGACGAAAGAACAGAATTTGGAAGAAGCTAAACGCGAACCTGAACCTGAACAAGTATTGGAAATGAAACATGAACCCAAGGTTAAACAAGTGACTTCTGATGAGGATGACATGTACAAATTTGGACTAGGGTTACATATGCGGTCTCAGTCGTTTCCTCAAAGATCTGTTTCCGAGCTAGCATTAAGTGACGGGCATCAGGAGTATAGTAGAAGCAGTTCTGATGTATTGAGTAGAGGTGAAAAACGACCATTGGAAATTAATGATTTCACGGATATATCTAAGAAACCTAGGGATTGGGCCTCTGCAAGTCCTCCACCGCATAATTACTTTAATCTTTCGAGCTCAAGAGGAGATCAGTCGTCTTCTCACGAGGGTGGTTCTTATGCAGAAGAGAAGCAGCTCTTTCCCAACTCGTTTAAGATATGTGACCTTAATTTAACAGGAGGTTCGGAAGCAAATGAAAATCGTGATACGAAGTCTGCCATTGGGTTTTTGCCACAAGCAAAGCAGGAACCGGTGTCGGTTGACTTTGACTTGACTATGAATAATAGCTGTGGTATAGTTGATAGACATGTTAGGCGTGGAATTGATGGCAAAGGGGTTGAAGTCATTGATTTGGATTGTGATTCCGTGCAAGACGACAACAATAACTCAGACCGGAGGGACGAAGCTATATTTACCGATCTTGAGAGCTTTCCGGACAATATACAGAGGGTAAGTGACCTTCCCCAAGATGGTTACGGTCTTATGATATCGGAGTTGCTAGATGCTGATATTCCTAATTCAAGTGTATCAACGGGCGTTAATTCTATGCATAATGAAATGAGCCTCCAAAATGAGGAGGGGATTCTTGGTGATGATGACTCAATATATATGTCACTGGGAGAAATACCAATAAGTTTCGTGCCAGTCTGGGATCAGCAGCCTTCACAAAGATATGATAAGCGCTATTAA 1773 42.64 MQRHRNQSNGFRSNGPVYRNYNNRGGGGGGGYRGPPPPRRVDVFMEAGRLATQYLLAKGLLNNNNNKGQNNYSTNNNDVNDVKSPVVVSDLRDENKVVRRSVKDPRIELSNNEISKDSEKIGEGDEAVLGGEEVKPVVSGDLELRNVETKVENEEKELRDEDVGVEAPVLEVTKMEGVESEEKSDDVKNVDVKTEEDVMMDDDDKKDEKTVVEEDVMEENENDNGNGNGNGKDSGSDLLTLIRDDNVPTRTRSSLTLKGSKSDPVLISGDENRTKEQNLEEAKREPEPEQVLEMKHEPKVKQVTSDEDDMYKFGLGLHMRSQSFPQRSVSELALSDGHQEYSRSSSDVLSRGEKRPLEINDFTDISKKPRDWASASPPPHNYFNLSSSRGDQSSSHEGGSYAEEKQLFPNSFKICDLNLTGGSEANENRDTKSAIGFLPQAKQEPVSVDFDLTMNNSCGIVDRHVRRGIDGKGVEVIDLDCDSVQDDNNNSDRRDEAIFTDLESFPDNIQRVSDLPQDGYGLMISELLDADIPNSSVSTGVNSMHNEMSLQNEEGILGDDDSIYMSLGEIPISFVPVWDQQPSQRYDKRY 590
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chmo15g01072 590 MobiDBLite consensus disorder prediction 368 401 - -
Chmo15g01072 590 MobiDBLite consensus disorder prediction 246 261 - -
Chmo15g01072 590 MobiDBLite consensus disorder prediction 175 213 - -
Chmo15g01072 590 MobiDBLite consensus disorder prediction 328 346 - -
Chmo15g01072 590 MobiDBLite consensus disorder prediction 153 305 - -
Chmo15g01072 590 PANTHER PROTEIN, PUTATIVE-RELATED 81 397 IPR040276 -
Chmo15g01072 590 MobiDBLite consensus disorder prediction 153 167 - -
Chmo15g01072 590 MobiDBLite consensus disorder prediction 62 81 - -
Chmo15g01072 590 MobiDBLite consensus disorder prediction 268 305 - -
Chmo15g01072 590 MobiDBLite consensus disorder prediction 328 355 - -
Chmo15g01072 590 MobiDBLite consensus disorder prediction 379 400 - -
Chmo15g01072 590 MobiDBLite consensus disorder prediction 1 20 - -
Chmo15g01072 590 MobiDBLite consensus disorder prediction 1 40 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chmo15g01072 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
213770 Chmo14g01122 Chmo15g01072
226377 Chmo15g01072 Chmo13g01220
239117 Chmo13g01220 Chmo15g01072
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chmo Chmo-Chr13:64360824 Chmo15g01072 Chmo-Chr15:61752041 wgd
Chmo Chmo-Chr14:59350058 Chmo15g01072 Chmo-Chr15:61752041 wgd