Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo15g01127 | ATGGCGAGAATTCCATGGGAGCCGTATGACGATTATGGAGAAAATGTAAGATGGGCAAGACATTATTGTTCGAATCATCAGATATTGTTGGTTGGAGAAGGGGATTTCTCATTTTCTTACAGTCTTGCTATGGCTTTTGGAGATGCTTCTAATATTGTAGCTACTTCTCTTGATTCTTATGATGTTGTGATCAAGAAGTACAAGAAAGCAAAAGCAAACTTGGAAATTTTGTATAGGTGTGGAGCACAGTTATTACATGGAGTCGATGCAATGAAAATGAAGCTTCATACTGATCTACAAATGAGAAAGTTTGACCGCATTGTTTACAACTTTCCACATGCTGGTTTTCTTGGGAAAGAAAGCGATAATCGTGTTATTACGCAGCATAAAAATCTGGTGTGTGGTTTCTTTAAGAACGCAAGTAAAATGTTGCATCCATACGGTCAAGTCCATGTATCCCACAAAACTACGAACCCATTTGACTTATGGAATATTGAAGAACTCGCTTCTCAAAGCTCTTTATCATTGTTCGAACGTGTGAAATTCAAGATTGAAGATTATCCTGGTTACAACAACAAAAGAGGAGAAGGTACAAGATCAGACAGCCCATTTCCTTTAGGAGAGTGCTGTACTTTCAAATTCAGATTATATTCAGAATCCAACGAATCAATCGGCTCACATAGTAGAAGAACTCAAGAACCCCAAATGTGTTCATCAGAAAGAGCGTACCCAAATATTGTTATGAATCATGCTCCTATTGTGAACAATAATCAATGCTATCGGGTTTTTAGGGAATATTTTGATCATGCACTTTCAACATTTGGGCAAGCTGATGACTATATTTCTCATTCTGTTCTGCATATGTTGAGGATCGGGTTTGAAAGATGCAGTGCTGAAGGTCATGTAAATCCCTTTAATGATTACATAAGTCATTTGAAAGAGCTTCAATATATAAGTAAAGGAAGGATAACATATATGCAGAACCGTTTACTGGAAATAGATCGACCGTATGGCTTGTAG | 1020 | 37.25 | MARIPWEPYDDYGENVRWARHYCSNHQILLVGEGDFSFSYSLAMAFGDASNIVATSLDSYDVVIKKYKKAKANLEILYRCGAQLLHGVDAMKMKLHTDLQMRKFDRIVYNFPHAGFLGKESDNRVITQHKNLVCGFFKNASKMLHPYGQVHVSHKTTNPFDLWNIEELASQSSLSLFERVKFKIEDYPGYNNKRGEGTRSDSPFPLGECCTFKFRLYSESNESIGSHSRRTQEPQMCSSERAYPNIVMNHAPIVNNNQCYRVFREYFDHALSTFGQADDYISHSVLHMLRIGFERCSAEGHVNPFNDYISHLKELQYISKGRITYMQNRLLEIDRPYGL | 339 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo15g01127 | 339 | PANTHER | PHENYLALANYL-TRNA SYNTHETASE | 21 | 205 | - | GO:0005737(PANTHER)|GO:0070042(PANTHER)|GO:0070475(PANTHER) | |
| Chmo15g01127 | 339 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 29 | 187 | IPR029063 | - | |
| Chmo15g01127 | 339 | FunFam | Os09g0479300 protein | 26 | 177 | - | - | |
| Chmo15g01127 | 339 | Pfam | rRNA (uridine-N3-)-methyltransferase BTM5-like | 29 | 194 | IPR019446 | GO:0070042(InterPro)|GO:0070475(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo15g01127 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr14:62122292 | Chmo15g01127 | Chmo-Chr15:64078822 | dispersed | |
| Chmo | Chmo-Chr14:62185780 | Chmo15g01127 | Chmo-Chr15:64078822 | dispersed | |
| Chmo | Chmo-Chr15:64078822 | Chmo4g00854 | Chmo-Chr4:42589147 | dispersed | |
| Chmo | Chmo-Chr15:64078822 | Chmo15g01128 | Chmo-Chr15:64084181 | tandem | |
| Chmo | Chmo-Chr13:67046484 | Chmo15g01127 | Chmo-Chr15:64078822 | wgd |