Gene detail

AGRP Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chmo15g01152	ATGGAGAAAAGAGATGATGAGGAGACAGAGTGTGATGATGATGATGATGATGATGATGATGATGATGATGTGGATAGGTCAGTATGCCTGACGGCATCGCATTTAAAGGGCGACGGCGTCAGATACTCAATCTCACAAAACGCTTACATCAAGCTCATCCTTCACGCTCTAAAACACAAAACCAGCGCCGTTAACGGCGTCTTGATCGGCCGCTTATCCGGCGATGTAGTCGAAATCACTGATTCGGTCCCGTTGTTTCACACTTCTCAGATCGGGTTGTTGCCGTCGCTTGAGATCGCTTTAATTATGATTGAAGAGTATTATAGTGGACAAGGATTGAGTATTGTTGGATATTTTCATGCTAATGAGAGGTGTGATGATGTGGAGCTTGGTGGTGTGGCCAAGAATATTGCGGATCATGTTTATCGTTATTTTCCGCAAGCTGCCGTGCTCTTGCTAGATAACAAAAAGCTTGGAGCATTGCGAAACAAGAAGGATGCAGCTCCTGTAGTGCAGCTGTATACACGCGACTCCTCTAAGAATTGGAAGCAAATTGAGTCAGAAGGAACCAAGCGGATTACCACCAAGGAACCTTCTGCCAATGTTGTCCTATTGGATTTTATTTCATCTGAGAAATGGAACGATATTGTGGACTTCGATGACCACCTTGATGACATTAGCAAGGATTGGTTGAACTCCGAACTCTTCAAGTAA	714	44.26	MEKRDDEETECDDDDDDDDDDDDVDRSVCLTASHLKGDGVRYSISQNAYIKLILHALKHKTSAVNGVLIGRLSGDVVEITDSVPLFHTSQIGLLPSLEIALIMIEEYYSGQGLSIVGYFHANERCDDVELGGVAKNIADHVYRYFPQAAVLLLDNKKLGALRNKKDAAPVVQLYTRDSSKNWKQIESEGTKRITTKEPSANVVLLDFISSEKWNDIVDFDDHLDDISKDWLNSELFK	237

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chmo15g01152	237	ProSiteProfiles	MPN domain profile.	42	172	IPR037518	-
	Chmo15g01152	237	Pfam	Uncharacterised protein family (UPF0172)	42	235	IPR005366	GO:0072546(InterPro)
	Chmo15g01152	237	CDD	MPN-UPF0172	44	232	IPR005366	GO:0072546(InterPro)
	Chmo15g01152	237	Gene3D	Cytidine Deaminase, domain 2	38	122	-	-
	Chmo15g01152	237	PANTHER	ER MEMBRANE PROTEIN COMPLEX	41	235	IPR005366	GO:0072546(PANTHER)\|GO:0072546(InterPro)
	Chmo15g01152	237	MobiDBLite	consensus disorder prediction	1	24	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chmo15g01152	K23569	ER membrane protein complex subunit 8/9

Event-related genes

Select	Gene_1	Gene_2	Event_name
	226402	Chmo15g01152	Chmo13g01332
	239142	Chmo13g01332	Chmo15g01152

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chmo	Chmo-Chr13:68858051	Chmo15g01152	Chmo-Chr15:65376373	wgd