Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo15g01176 | ATGGATGCCGAAAGAGCATCTCTTCTAGCAAAACGAAGAGATATCACTCGCACGAAATCTAGTGCTCACGATGAGTTACACAGTTTCAGGTCATGGCTACAGTGGATGTGTGTCGATCAATCCACACATTGGACGTTTTGTCTTTCTTGGTTTGTTTTCATAGTTTTTGCTATCGTGATTCCTATCTTATCGCATTTCTTTCTAGCATGTAGTGGCTGCGATAATAGACATGAAAGGCCTTATGATAGGCTTGTTCAGTTGTCACTTACTAGCATTGCCACACTTTCGTTCGTTTGTTTGTCCCAGTTTGTTAGATATTATGGACTTCGTAGGTTTTTGTTTTTTGATAAGCTTTGTAATGAAAGTGAGACTGTTCGCAGAGGTTATACGCAACAACTCAATAGCTCGCTTAAAATAGTCTTCATATTTGTTGCCCCATGTTTTACCGCCGAGGCTGCATATAAGATCTGGTGGTACAGTTCAGGAGCTACCACTATACCATTCTTGGGTAACACTATTGTGATTAACATCCTAGCATGCTCTTTAGAGCTCTGTTCTTGGCTCTATAGAACCTTAGTGTTCTTCCTAGTTTGTGTCCTGTTCCGTCTTATTTGTCATCTACAAATCCTCCGTCTACAAGATTTCGCTCAGGTGTTCCATGTAGACTCTGATGTTGAGTATGTAATGAGGGAACATCTAAGGATTAGGAGGCATCTTCGCATCATAAGTCATAGATACCGTATCTTTATAATGTGGGCCCTCATTCTTGTCACAATCAGTCAATTTGCAGCTCTTCTTGACACTACACGGTCTAAAGCAGATCTTAGCATCTTCAAAACTGGCGAACTTGCAATTATTTCTGTAAGCTTACTTGCTGGACTAATGATACTACTAAGGAGTGCCACCAGGATCACCCATAAGGCTCTAGGCGTGACGTGCCTGGCTACTAAGTGGCATGTGTGTGCAACCATCGACTCCTTTGATACACCTGAACTAGAAACAGAAACCCCGCCTACCACTGCTATGGGAAACCAAGTTTTCCCTCATGATGCATCATCTGATAATGAGGATGTTGGTAGTGAAGACGAGTTAGATAACACTAAACTAATACCTGCTTATGCTTCAAGTACCATCTCATTCCAGAAAAGGCAAGCCTTAGTGACGTATTTTGAGAACAACAGAGCGGGGATAACAGTTTTTGGATTTATGCTAGATAGGACTACATTGCACACCATAGTGATGATAGAGATGTCACTCGTGTTGTGGTTGCTTGGAAAGACTGTCGGTATCTCTTAA | 1296 | 41.67 | MDAERASLLAKRRDITRTKSSAHDELHSFRSWLQWMCVDQSTHWTFCLSWFVFIVFAIVIPILSHFFLACSGCDNRHERPYDRLVQLSLTSIATLSFVCLSQFVRYYGLRRFLFFDKLCNESETVRRGYTQQLNSSLKIVFIFVAPCFTAEAAYKIWWYSSGATTIPFLGNTIVINILACSLELCSWLYRTLVFFLVCVLFRLICHLQILRLQDFAQVFHVDSDVEYVMREHLRIRRHLRIISHRYRIFIMWALILVTISQFAALLDTTRSKADLSIFKTGELAIISVSLLAGLMILLRSATRITHKALGVTCLATKWHVCATIDSFDTPELETETPPTTAMGNQVFPHDASSDNEDVGSEDELDNTKLIPAYASSTISFQKRQALVTYFENNRAGITVFGFMLDRTTLHTIVMIEMSLVLWLLGKTVGIS | 431 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo15g01176 | 431 | PANTHER | RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K | 10 | 430 | IPR021924 | - | |
| Chmo15g01176 | 431 | Pfam | Protein of unknown function (DUF3537) | 24 | 415 | IPR021924 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo15g01176 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 49344 | Chmo15g01176 | Chmo22g05337 | |
| 49345 | Chmo15g01176 | Chmo23g05248 | |
| 49346 | Chmo15g01176 | Chmo24g05353 | |
| 226419 | Chmo15g01176 | Chmo13g01355 | |
| 239159 | Chmo13g01355 | Chmo15g01176 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr15:67573954 | Chmo23g05249 | Chmo-Chr23:304070798 | dispersed | |
| Chmo | Chmo-Chr11:5552376 | Chmo15g01176 | Chmo-Chr15:67573954 | transposed | |
| Chmo | Chmo-Chr13:70375564 | Chmo15g01176 | Chmo-Chr15:67573954 | wgd | |
| Chmo | Chmo-Chr15:67573954 | Chmo22g05336 | Chmo-Chr22:312203125 | wgd | |
| Chmo | Chmo-Chr15:67573954 | Chmo23g05248 | Chmo-Chr23:304050897 | wgd | |
| Chmo | Chmo-Chr15:67573954 | Chmo24g05353 | Chmo-Chr24:309917337 | wgd |