Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo15g01208 | ATGAAGACTAAGAGCAATCAGGTAACCAAGAGCAAGCCAGAAATACAAACCCAAGCTTCACAGGAGTCCCCAAGTGACCAACATAACGATGCTACAGAGGCTCCTGTTCCTGACACTGGATCAGCCTCCATTTCGAGCAATGACAACAGAAAAGTTTCTCGAGAGGATATTGAACTTGTCCAGAACTTGATAGAACGCTGTTTGCAGCTGTATATGAACAAAGACGAGGTTGTGAAAACCTTACTAAATCGTGCAAGGATAGATCCTGGATTTACAGCTTTAGTGTGGCAGAAATTGGAAGAAGAGAATGCAGACTTTTTTAGAGCCTACTACATAAGGCTGAAACTGAAGAAGCAGATCATCCTGTTTAATCATTTGCTTGAACATCAGTACCATCTTACCAAGCATCCAGTGCATCCAAGGCTTCCTCTTGCTCCTATACAAAATGGCATCCATCCTATGCCAGTTAACAACTTACCAATGGGGTACCCTGTTCTACCACAACCTTCAATGGCAACTACTGGCCAACCTCATATGAATGCCATTGGTATGTCCAATTGTCATGTAGTCAATGGAGTGCCTGCTTCAAGTAACTTCCATCCAATGCGGATGAACTCTGGAAAGGGAAGTATGGGGATGGATAGTAGTGCAGCTGATGCCACACCAGCTATTCCAGGGAATGGGGCAATATCACCCATGTCAGATATGCCTATGAGCCCTACATCAGCATCCAGTGGTCATTTCCCGTTTACTACATCTGAAATATCGGGAATGGGAGTAGACACATCAGCTCTTGATACAGCTTTTACATCTGACGTGGCAAGTTCTGTAGACTTGCATCTGCAACCTGATAATGGAACTTCTAGAGCTTTTGGTCATATCCCTTGGAATTTCAGCCTTTCAGATCTTACAGCAGATTTGTCAAATTTGGGAGATCTCGGAGCTCTTGGAAACTATCCTGGCTCCCCCTTTCTGCCATCTGATTCAGATTTATTACTTGATTCCCCGGAACAAGAGGACATTGGTAAGAACACTATATCCCCAGTTCTATGTTTATTTAGCTTCATACTTCCAGATAAAAAAGGTGTGCTAATTAAAACTCCTTTTGCTTTATGGCATTATAACTTGTTATCAAATTGA | 1140 | 42.63 | MKTKSNQVTKSKPEIQTQASQESPSDQHNDATEAPVPDTGSASISSNDNRKVSREDIELVQNLIERCLQLYMNKDEVVKTLLNRARIDPGFTALVWQKLEEENADFFRAYYIRLKLKKQIILFNHLLEHQYHLTKHPVHPRLPLAPIQNGIHPMPVNNLPMGYPVLPQPSMATTGQPHMNAIGMSNCHVVNGVPASSNFHPMRMNSGKGSMGMDSSAADATPAIPGNGAISPMSDMPMSPTSASSGHFPFTTSEISGMGVDTSALDTAFTSDVASSVDLHLQPDNGTSRAFGHIPWNFSLSDLTADLSNLGDLGALGNYPGSPFLPSDSDLLLDSPEQEDIGKNTISPVLCLFSFILPDKKGVLIKTPFALWHYNLLSN | 379 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo15g01208 | 379 | PANTHER | OS02G0137100 PROTEIN | 54 | 327 | IPR006476 | - | |
| Chmo15g01208 | 379 | Pfam | Plant protein 1589 of unknown function (A-thal-3526) | 60 | 111 | IPR006476 | - | |
| Chmo15g01208 | 379 | NCBIfam | TIGR01589 domain | 57 | 113 | IPR006476 | - | |
| Chmo15g01208 | 379 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
| Chmo15g01208 | 379 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo15g01208 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 49373 | Chmo15g01208 | Chmo16g00863 | |
| 49374 | Chmo15g01208 | Chmo16g00864 | |
| 49375 | Chmo15g01208 | Chmo17g00767 | |
| 49376 | Chmo15g01208 | Chmo18g00856 | |
| 213804 | Chmo14g01230 | Chmo15g01208 | |
| 226433 | Chmo15g01208 | Chmo13g01381 | |
| 239173 | Chmo13g01381 | Chmo15g01208 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr15:70236926 | Chmo16g00864 | Chmo-Chr16:37059987 | dispersed | |
| Chmo | Chmo-Chr13:72039955 | Chmo15g01208 | Chmo-Chr15:70236926 | wgd | |
| Chmo | Chmo-Chr14:64537492 | Chmo15g01208 | Chmo-Chr15:70236926 | wgd | |
| Chmo | Chmo-Chr15:70236926 | Chmo16g00863 | Chmo-Chr16:37058661 | wgd | |
| Chmo | Chmo-Chr15:70236926 | Chmo17g00767 | Chmo-Chr17:31840591 | wgd | |
| Chmo | Chmo-Chr15:70236926 | Chmo18g00856 | Chmo-Chr18:36244022 | wgd |