AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo16g03223 | ATGGCACTTTTGGAGTCAAAAAAGGACAGAGGTGAGGTGAGGATTCATGAGAGTTTGGAAGAACTTAGCACCGATTTAGCGGATTACATAGCGGAATTATCTGAAGCATCGGTTAAAGAACGAGGTTTTTTCGCCATTGCTTTATCGGGTGGTTCACTTATTAGCTTGATGAGGAATTTGTGTGGAGCACCTTATAACAAGACTGTAGATTGGTCTAAATGGTATATATTTTGGGTGGATGAACGTGTTGTTGCGAAGAATCATGTTGATAGTAACTATAAGCTTGCTAAAGATCATCTGTTGTCCAAGTTGCCTATTGTTCCAAGCCATGTACATTCCATCAATGATTCTCTCACAGCAGAAGAAGCTGCAAATGAGTACGAGTTTGTGATCAGACAGTTAGTCAGAACCCGCGTGGTTAATGTTTCTGATGTCAGCGACTGCCCGAAGTTTGATCTAATCCTACTAGGGATGGGGCCAGATGGTCACGTGGCATCTTTGTTCCCTAACCATTCAGTTCTTGAAGAAAAGAATGAATGGGTGACATTCATCACCACATCCCCTAAACCACCACCCGAAAGAATCACATTCACATTGCCTGTTATCAACTCTGCAGCCAATGTGGCAGTAGTCGTGACAGGTATAGAAAAAGCGGAAGCTGCCCGTCTGGTGATAGATGACGTGGGACCTGAGTGCCCGGTTTTGCCAGCTAGGATGATTGAGCCAGCTGTAGGGAAACTGGCCTGGTTTTTGGATAACCAGGCTGGTTCAAAGCTAAAGTGCTTTTCTCAAAATTCTAAGTAG | 804 | 43.91 | MALLESKKDRGEVRIHESLEELSTDLADYIAELSEASVKERGFFAIALSGGSLISLMRNLCGAPYNKTVDWSKWYIFWVDERVVAKNHVDSNYKLAKDHLLSKLPIVPSHVHSINDSLTAEEAANEYEFVIRQLVRTRVVNVSDVSDCPKFDLILLGMGPDGHVASLFPNHSVLEEKNEWVTFITTSPKPPPERITFTLPVINSAANVAVVVTGIEKAEAARLVIDDVGPECPVLPARMIEPAVGKLAWFLDNQAGSKLKCFSQNSK | 267 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo16g03223 | 267 | CDD | 6PGL | 20 | 251 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Chmo16g03223 | 267 | SUPERFAMILY | NagB-RpiA-CoA transferase-like | 13 | 261 | IPR037171 | - | |
| Chmo16g03223 | 267 | NCBIfam | 6-phosphogluconolactonase | 15 | 259 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Chmo16g03223 | 267 | Pfam | Glucosamine-6-phosphate isomerases-6-phosphogluconolactonase | 19 | 249 | IPR006148 | GO:0005975(InterPro) | |
| Chmo16g03223 | 267 | Coils | Coil | 19 | 39 | - | - | |
| Chmo16g03223 | 267 | FunFam | Probable 6-phosphogluconolactonase | 8 | 260 | - | - | |
| Chmo16g03223 | 267 | Gene3D | - | 9 | 262 | - | - | |
| Chmo16g03223 | 267 | PANTHER | 6-PHOSPHOGLUCONOLACTONASE | 5 | 260 | IPR039104 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo16g03223 | K01057 | 6-phosphogluconolactonase [EC:3.1.1.31] |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1314694 | Chmo | Chmo16g00691 | Chmo-Chr16:29729030 | Chmo16g03223 | Chmo-Chr16:211301445 | |
| 1316944 | Chmo | Chmo16g03223 | Chmo-Chr16:211301445 | Chmo23g03183 | Chmo-Chr23:220637453 | |
| 1483499 | Chmo | Chmo10g03824 | Chmo-Chr10:262330924 | Chmo16g03223 | Chmo-Chr16:211301445 | |
| 1488037 | Chmo | Chmo11g03773 | Chmo-Chr11:238433640 | Chmo16g03223 | Chmo-Chr16:211301445 | |
| 1506506 | Chmo | Chmo16g03223 | Chmo-Chr16:211301445 | Chmo17g03377 | Chmo-Chr17:229874727 | |
| 1509428 | Chmo | Chmo16g03223 | Chmo-Chr16:211301445 | Chmo18g02879 | Chmo-Chr18:233327412 |