Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chmo25g01441	ATGGTACTAGGATTGAAGACGAGAAACAGGAACAGCCCGTACGTCCATCTTGATTACGTTATCAATCTAGTAGAGATTAAGCCGTGGCCTCCATCACAGTCGCTAAGATCAGTTCGGTCTGCATTGATTCAATGGGAGCATGGTGACAAGTTTTCAGGGTCTACTAAAGCAGTTGCGCCTTCAAATGCTTTTGGTTTGGGTGTAGGTGATGGTAAAATCGAGTTTAATGAGTCTTTCAAACTTCCTGTGACATTATCACGGGATATGTCAGTTAAGACTAGCAATAACGAATCTTTCTTAAGGAATTGTGTAGAGTTTAATATGTACGAACCACGTAGGGACAAAACGGTAAAAGGGCAGTTGTTGGCTACTGCAGTTATAGATTTTGCGGAGTATGGTATTTTTGACGATAGTTTGGTTATTTGTGTGCCTATGAATTGCAAGAGGATGTTTGGTAATACGGCTCAGCCTATGCTTTTTGTTGAAATCCAAATGGTTGAGAAGAATAACCGCATGAGGTGTTCATTTGGGGAGAGATTGATAAGGGAAGGATCGCTGGATAGGAATGTTTGTGCGTTGATGAATGCAGAGTATGCTGAGGAAGCTGACACTGCCTCCGTTACAGATAATAATGAGGATGATGATGTTTCCTCCCAGTCTTCCATGGATACTGGTTCTTCAGCGTCTGGTTCAAATGGGAATGTAACTCCTCAAAGTGAGAAAGGGTCTGAAGCCATTTGTGGAAGCTCAGAAAAGGTCAATAGTCAAGAAGTCTCAGTTCAAAGTAAAAGGGCCATATTTGAAGAACGTATTTCATCATCAAAAGACTTATATTCTGAACTAGAAAATGCTCGTACCACTTTATCAAATCTCCGTAACTCAAGATTCACAATGCTCCCACAAAAGACTGAATCATGTAGTAGTGTGAAACTATCAAAGCCGATTGGTAAGAATGACACTAGAAAAGTGATGGTCTATGAAGCGAACAATGGAAGTCAAATCATTGGAGATATTGGAACTGATGGTGATAGTAAAAGGAATGCGAAGCGACTTGATTCTTCAATGGATTCAGGAATAAGCAACGGGTCAGTTAGAACTAGCAAAGTATTAGAGAAATTTAAAAACGTCGGTATTTGTGACAAGAATTATGAGAAGAACTTAACAGTTAATGAGATAAGTGATGCAAGCAAAGTACAACACTTGGAACAAAGAATGAAACTTCTTGAAGGCGAACTACGAGAATCTGCAGCTATTGAGATTAGTCTTTACTCAGTAGTTGCAGAGCACGGAAGATCCACTAATAAAGTTCATGCCCCTGCTCGACGTCTTTCTAGGTTGTACCTTCATGCATGCAAAGATAATTCTTTCAGGAGAGCAAGTTCAGCAAAAAGTATTGTGTCAGGACTGATTTTAGTCGCAAAAGCTTGTGGAAATGATGTCCCAAGGTTGACTTTCTGGTTGTCAAATTCTGTTGTACTAAGAGCCATAATACATAAAAAATTTGACAAGGAGAAGGTATCTGGGATAGTTGAGAAAGGAAGTACCGAGAATTCTAATGAACGGGAGGACCCTTGTATGGTTATATCTTTGTTGGAAAAAGTAGAATCTTGGATCTTCATGCGCATTATTGAGTCCATCTGGTGGCAGACTCTTGCTCCTTATATGCAATCCACTGCTGCAAAGGGAATCCCTAGAGTTGTAGATTCAGGCTATAATAAAACCTGTCAAACAACATCTGGTTCACTTGAGCATGAGCGAGTCCACACCTCCTTGAAACTTTGGAAAACCGCTTTCATGGATGCTTGTGAAAGAATTTGTCCTGTTCGAGCTGCAGGACATGATTGCGGTTGCTTGAGTATCCTTTCTATGTTGATAATGGAGCAATGCATGGCTAGATTAGATGTAGCTATGTTCAATGCCATTCTTCGTCAGTCGGAAGATGAAGGTCCAACGGACCCTGTATCAGACCCCATCAGTGATGCTGGGGTTCTTCCTATTCCATCAGGGAAAGCAAGCTTTGGAGCCGGTGCACAACTGAAAACGACAATAGGAAACTGGTCCAGTTGGCTCACAGATCTATTTGGCTCACCTATCTCTTTTCATATCCTTACTGCTCTGAGTGAGCTCATGATGCTTCCTAAGGATATGCTCTTAAGTAACACAGTCCGAAAAGAGGTGTGCCCTAATATTGGTGTAGCATTAATAAAGAGGATACTTGATAGATTCGTTCCAGATGAATTTTGCCCAGATGTGATTCCCGAGGTGGTTCTTGAATCACTAAACTCAAAGGATTTAATGGAGAGTGGCGAAGATTGTATTACAAGTCTCCCCTGTCGAGCAGCTCCTATTGTATATCAACCTCCTTCTGCATCTCTAATAGGATGCATCTTAGGAAATGATGGAAGCCGAGCTCATTTGTCACGCAGTGGATCATCAATCCTAAAAAAGTCAAATACAAGCGATGATGAACTCGATGAATTGGATTCACCTTTGACTTTAATAATTGACTCCTGTCAGCCTGTAGCTGCATCAACAAAACCTGTATGGGCATTGAAAGATGTCGGAAATGGCAATACTAGTATTAGGTATCAACTCCTTAGAGAGGTATGGATGAGTAGCGATTAG	2625	40.99	MVLGLKTRNRNSPYVHLDYVINLVEIKPWPPSQSLRSVRSALIQWEHGDKFSGSTKAVAPSNAFGLGVGDGKIEFNESFKLPVTLSRDMSVKTSNNESFLRNCVEFNMYEPRRDKTVKGQLLATAVIDFAEYGIFDDSLVICVPMNCKRMFGNTAQPMLFVEIQMVEKNNRMRCSFGERLIREGSLDRNVCALMNAEYAEEADTASVTDNNEDDDVSSQSSMDTGSSASGSNGNVTPQSEKGSEAICGSSEKVNSQEVSVQSKRAIFEERISSSKDLYSELENARTTLSNLRNSRFTMLPQKTESCSSVKLSKPIGKNDTRKVMVYEANNGSQIIGDIGTDGDSKRNAKRLDSSMDSGISNGSVRTSKVLEKFKNVGICDKNYEKNLTVNEISDASKVQHLEQRMKLLEGELRESAAIEISLYSVVAEHGRSTNKVHAPARRLSRLYLHACKDNSFRRASSAKSIVSGLILVAKACGNDVPRLTFWLSNSVVLRAIIHKKFDKEKVSGIVEKGSTENSNEREDPCMVISLLEKVESWIFMRIIESIWWQTLAPYMQSTAAKGIPRVVDSGYNKTCQTTSGSLEHERVHTSLKLWKTAFMDACERICPVRAAGHDCGCLSILSMLIMEQCMARLDVAMFNAILRQSEDEGPTDPVSDPISDAGVLPIPSGKASFGAGAQLKTTIGNWSSWLTDLFGSPISFHILTALSELMMLPKDMLLSNTVRKEVCPNIGVALIKRILDRFVPDEFCPDVIPEVVLESLNSKDLMESGEDCITSLPCRAAPIVYQPPSASLIGCILGNDGSRAHLSRSGSSILKKSNTSDDELDELDSPLTLIIDSCQPVAASTKPVWALKDVGNGNTSIRYQLLREVWMSSD	874

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chmo25g01441	874	Coils	Coil	398	418	-	-
	Chmo25g01441	874	MobiDBLite	consensus disorder prediction	337	358	-	-
	Chmo25g01441	874	Pfam	N-terminal C2 in EEIG1 and EHBP1 proteins	18	167	IPR019448	-
	Chmo25g01441	874	PANTHER	NUCLEAR PORE COMPLEX PROTEIN NUP205	12	872	IPR021827	GO:0005643(InterPro)
	Chmo25g01441	874	Coils	Coil	274	294	-	-
	Chmo25g01441	874	ProSiteProfiles	C2 NT-type domain profile.	7	167	IPR019448	-
	Chmo25g01441	874	MobiDBLite	consensus disorder prediction	211	262	-	-
	Chmo25g01441	874	MobiDBLite	consensus disorder prediction	202	262	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chmo25g01441	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	56233	Chmo25g01441	Chmo4g02160
	56234	Chmo25g01441	Chmo5g02028
	56235	Chmo25g01441	Chmo6g01638
	221541	Chmo25g01441	Chmo26g01571
	246122	Chmo27g01217	Chmo25g01441

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chmo	Chmo-Chr25:121328802	Chmo27g02701	Chmo-Chr27:173832331	dispersed
	Chmo	Chmo-Chr23:82532706	Chmo25g01441	Chmo-Chr25:121328802	transposed
	Chmo	Chmo-Chr25:121328802	Chmo26g01571	Chmo-Chr26:132519092	wgd
	Chmo	Chmo-Chr25:121328802	Chmo26g02685	Chmo-Chr26:183198273	wgd
	Chmo	Chmo-Chr25:121328802	Chmo27g01217	Chmo-Chr27:99783374	wgd
	Chmo	Chmo-Chr25:121328802	Chmo27g02732	Chmo-Chr27:174745872	wgd
	Chmo	Chmo-Chr25:121328802	Chmo4g02160	Chmo-Chr4:146634822	wgd
	Chmo	Chmo-Chr25:121328802	Chmo5g02028	Chmo-Chr5:145254371	wgd
	Chmo	Chmo-Chr25:121328802	Chmo6g01638	Chmo-Chr6:127705605	wgd