Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo25g01491 | ATGGAGGGTGGTTCATGGATGGTGCTTGAAAACGATGCTTTTTATGTACCAACACTGAGTAGCTCAGTTGGATTGAAGCCTTCAGAAGATTACACAGCAATCGAGCTAGTTGGCACAGACAGACCTGGATTGTTATCTGAAGTATCTGCAGTACTAACAGATCTTGGTTGTAATGTGGTGAATGCTGAAATATGGACTCACAACGCTAGAGCTGCAGCCGTGGTACACGTCACAGATGAGAAAACGAGATGTGCAGCTGAAGACCCAAAGAGGCTCTTAACTATTAAGAAACTGCTTTGTAATGTTCTTAAGGGAAACAATGACTTGAAAACTGCAAAAAGGACACTTTCGGCTCCTGGTTACATGCACAGGCAGAGAAGATTACATCAAATTATGTTTGCTGAGTGGGATTATGAAAAGATTGAAAGGGCGGAACAGGAAGATAGGTTAAGGCCACAGGTTACTGTTTTAGATTGCGTTGAGAAGGATTACACGGAGTATGTAGTCTTCCATGGAGTTGTTATTTGA | 528 | 42.23 | MEGGSWMVLENDAFYVPTLSSSVGLKPSEDYTAIELVGTDRPGLLSEVSAVLTDLGCNVVNAEIWTHNARAAAVVHVTDEKTRCAAEDPKRLLTIKKLLCNVLKGNNDLKTAKRTLSAPGYMHRQRRLHQIMFAEWDYEKIERAEQEDRLRPQVTVLDCVEKDYTEYVVFHGVVI | 175 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo25g01491 | 175 | Gene3D | - | 28 | 102 | - | - | |
| Chmo25g01491 | 175 | ProSiteProfiles | ACT domain profile. | 33 | 117 | IPR002912 | - | |
| Chmo25g01491 | 175 | SUPERFAMILY | ACT-like | 28 | 85 | IPR045865 | - | |
| Chmo25g01491 | 175 | CDD | ACT-ACR-2 | 32 | 105 | - | - | |
| Chmo25g01491 | 175 | Pfam | ACT domain | 33 | 81 | IPR002912 | - | |
| Chmo25g01491 | 175 | PANTHER | ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED | 24 | 165 | IPR040217 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo25g01491 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr25:125746083 | Chmo26g01617 | Chmo-Chr26:135196994 | dispersed | |
| Chmo | Chmo-Chr25:125710191 | Chmo25g01491 | Chmo-Chr25:125746083 | proximal | |
| Chmo | Chmo-Chr25:125746083 | Chmo25g01494 | Chmo-Chr25:125793872 | proximal | |
| Chmo | Chmo-Chr25:125746083 | Chmo27g01452 | Chmo-Chr27:113003478 | wgd |