Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo25g01539 | ATGGCGGCGGATCAGCTGAATAAGCGTTCTAAAGGAAGCAACGTTACCCATCACACTTCTTGGGAGCTGCAGAAAACGAAGAAGGCAAAATTTTCTCATTATGAGTTAAATACAAGATCAAGTATTTCTCTCGAGTGGGATGACAAGAAGAAACATGTTGTTCCAAAGAAGGAGCAGATAAGTATTGCTCGTAGAGAGTTGACACCGTTTCTTCCTCATGTTCCACATCACCAGAATGTCTTGGGTGATGTCTTTGCAGCTCCTTCTGAGCTATTTGAACTGAATGACTTGACTGGTTTGCTGTCGTATGAGGTTTGGCAAACTCAATTGTCTGTACAAGAAAGAGAGTTTCTGACCCAGTTTCTTCCAGAAGGAGCTGACCCACATACCGTTGTTGATGACTTGTTATCTGGGAGCAATTTTTGCTTTGGAAGTTCATTCCAAAAATGGGGTACTTCAGTTTGTTCCGGTGATTGTCATCCTGATGCTGTTCTTCGTCAAGAACAGTGTAACAAGGCTAACAAAATAGCATATTATAAGGAATTGCAAGAGTATCATACCAAAATGATAGGGAGTCTGCAATTGTGGAAGGAAACATGGGCATGCTGTGTGAATCTGGAAAATGACTTTAGCCAACAGATACCGAGGCCCATGAATGAATATGACAAAAATGGCTCCTCACATCAGAAAGACATACATGGTAGTCCTGAAGATGATGTGGGTGCAACATCTGATTCTGGTTATTTCGATGCTGAAGATAAGTCATATAGTAGCAATAGCCCGGATGTAGCAGTCATGAACGGAAAAACTTCAACAAGGGTCTCGAAAATGGAATCAGAGAACAATTATTTTGACTCTTCAGTTGGATCGAAATCGGTAGCAAGATCTAGAAAAGGAGATAAATTACGCAGGCTCAGTGTAGAGTGTGGTGATGGTGCCAAATATATGTCATATATCAAGGTTAGCAAAGTTCAGCATGAACAAGTTAAAAGCAGTATGAAACACTCTAACACCGGTATCCAACAGAGGTCTCTGAGTCACGTTTTAGGCAATCTTGATAGTTTCTGTGTTATACCATATGAAGTGTTTGAAGAAGAAGAGAGACTGAAGCTGCACGAACACTGGTCTAATTTGGCAAAGAAAGATCTCCCTGCGGGCTTTGCAAATTGGAATAGTTGGCGATCTGCCAGGTGGCAGTTAGGAATATCGTTAAGGAAAGAAATGGAAGATAGAGTGAAGTCAAATGATCAACCAGTTTCAAGTTTTTGTAATCAGGATGAGGAGTTAAAATATGGTGATGTTCAGGACAACATGGAACAAAACGGCGATGCAGTGCTCCATTCAGAGGCGAATCTTAATGCAGAAAACCATGAAACAGCAATGGAAGTTGAACCAAATGATCAGCTTAATCAATGCTCGCGTCAGAATCAGCATCTACCACAGATTAATGTAATACATAATGATGGCCAAAACTTCTGCTCCATGCCCATGGATGCTGCCAATGATGATGTATTGATCCAGTCAAGTGCTTTTCCTTCTAGTCTATGTGAATATCCCGCAAGTATAAATCGTGCAGATGCATCAGTTGGTGAACAAATATGGCCTGAAGTTAGCTTACCACAAAGTGTATACTATCACCATCCGACATCTTTAAGTGTAAGCAATGGATACGCTTCTGTTGGTGAATTGTCACTAGGCCAGTCGAGGCAACCAATTGTTCTAGAATCCGAGTTACTACAAAAGGATCCTCTTAGAAGTTTTATGCACAAAGGATCTGATGGTGGTGATTCTTTCTTTAATCCATATGCTAATCAAGACCGTAACGAATTACTACTCCAATCACTTTATAAAGATCCCGGGAATTCTCATTATCTTCATGAACAGAAGCTTTCTAGTTTATCTTTCCACCCAACCGCGAGTGACCCGATGCTGGGAACCAATCAATTTCCTAGAAATTTGTGCCCATCGATGCTAATGGATCCTGTGCTTCCGACCCTTCAAGAAAACTTATATTCAATTCCAAGGCAAGAACACTTGTTGCCAATGAATAACGTTCATGATTGGCCCGGGAATAGTGGTATTAACCTTCCCATGACATCATCATCCCATCATCGCTTAAATCAAAATTGGTATCATGCTGATGAGGTGGTGCACAATGGGTGGTCTGGCGGTGTAGTACCGAACCAGGACCTTCTGAATAGTGCTCAGGTAGTTGATGAGAGCTTATTTAGCGTTTTAGCTCAGCATAATGGGGCCCATATTGGTTCAACCGGTGCAATGCAACAGTTTATTCCTTCTGGGAATTATGTCGGAGTTGGGGTTGGGCTTGGTGCAGTTGCGCCTACATTTACTGCTGTACCTCCTCGGACCGGCACAGGGTCAGGTTTCAACTACATGAGTAGCAATGAAGCACAGTTAGGATGGATGAACTTGCCGCATGCATTGCAGGGGACCGGTAAATCATTTCCAAGACTATGGTATGACAAAGATATAGGACGGTGA | 2502 | 42.05 | MAADQLNKRSKGSNVTHHTSWELQKTKKAKFSHYELNTRSSISLEWDDKKKHVVPKKEQISIARRELTPFLPHVPHHQNVLGDVFAAPSELFELNDLTGLLSYEVWQTQLSVQEREFLTQFLPEGADPHTVVDDLLSGSNFCFGSSFQKWGTSVCSGDCHPDAVLRQEQCNKANKIAYYKELQEYHTKMIGSLQLWKETWACCVNLENDFSQQIPRPMNEYDKNGSSHQKDIHGSPEDDVGATSDSGYFDAEDKSYSSNSPDVAVMNGKTSTRVSKMESENNYFDSSVGSKSVARSRKGDKLRRLSVECGDGAKYMSYIKVSKVQHEQVKSSMKHSNTGIQQRSLSHVLGNLDSFCVIPYEVFEEEERLKLHEHWSNLAKKDLPAGFANWNSWRSARWQLGISLRKEMEDRVKSNDQPVSSFCNQDEELKYGDVQDNMEQNGDAVLHSEANLNAENHETAMEVEPNDQLNQCSRQNQHLPQINVIHNDGQNFCSMPMDAANDDVLIQSSAFPSSLCEYPASINRADASVGEQIWPEVSLPQSVYYHHPTSLSVSNGYASVGELSLGQSRQPIVLESELLQKDPLRSFMHKGSDGGDSFFNPYANQDRNELLLQSLYKDPGNSHYLHEQKLSSLSFHPTASDPMLGTNQFPRNLCPSMLMDPVLPTLQENLYSIPRQEHLLPMNNVHDWPGNSGINLPMTSSSHHRLNQNWYHADEVVHNGWSGGVVPNQDLLNSAQVVDESLFSVLAQHNGAHIGSTGAMQQFIPSGNYVGVGVGLGAVAPTFTAVPPRTGTGSGFNYMSSNEAQLGWMNLPHALQGTGKSFPRLWYDKDIGR | 833 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo25g01539 | 833 | PANTHER | NFRKB-RELATED | 1 | 457 | IPR024867 | GO:0031011(InterPro) | |
| Chmo25g01539 | 833 | MobiDBLite | consensus disorder prediction | 250 | 266 | - | - | |
| Chmo25g01539 | 833 | MobiDBLite | consensus disorder prediction | 223 | 238 | - | - | |
| Chmo25g01539 | 833 | ProSiteProfiles | DEUBAD (DEUBiquitinase ADaptor) domain profile. | 88 | 199 | IPR044867 | - | |
| Chmo25g01539 | 833 | CDD | DEUBAD-NFRKB | 90 | 196 | - | - | |
| Chmo25g01539 | 833 | MobiDBLite | consensus disorder prediction | 214 | 266 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo25g01539 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 221577 | Chmo25g01539 | Chmo26g01663 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr25:128097106 | Chmo26g01663 | Chmo-Chr26:136897000 | wgd |