Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo26g01615 | ATGGGTTCCGAAATAACAGAACCATTCCTAACAGACTCATCATCTGAACAACCCAAACAACCAGACAATGATGATCTAGAATCCATACCAGAATGGAAAGATCAGATCACACTAAGAGGACTGATAGTCAGTGCTTTGTTAGGGACTTTGTTTTGTATCATAACTCATAAGCTGAATTTAACAGTGGGGATTATCCCTTCGTTGAATGTAGCGGCAGGGTTGTTGGGGTTCTTTTTTGTCAAGTCGTGGACTAGTGTTGTGGAGAGGTTTGGTGTTGTTGTTAAGCCGTTTACGAGGCAGGAGAATACTGTTATTCAGACTTGTGTTGTTGCTTGTTATGGCCTTGCTTTTAGTGGTGGATTTGGGTCATATTTGCTTTCAATGGATGAGAGAACATACAATTTGATTGGTGCGGACTACCCGGGTAACCGGGCTGAGGATGTTAAGAACCCGGGGCTATTGTGGATGATGGGTTTCATTTTTGTCGTCAGTTTTCTTGGCCTTTTTAGTCTTGTTCCACTTCGCAAGGTCATGGTAATGGATTATAAGCTTACATACCCTAGTGGAACTGCCACTGCAATGCTGATCAATAGTTTTCACACTACCACTGGTGCAGAGCTTGCAAGGAAACAAGTAAACTGTCTTGGAAAGTATTTGAGCATAAGTTTTGTCTGGAGTTGCTTTAAGTGGTTTTTCAGTGGTGTTGGGGATGCTTGTGGTTTTGACAATTTTCCGAGTTTTGGCTTGATGTTGTACAACAACACATTCTACTTTGACTTCAGTCCAACTTATGTCGGATGTGGTCTTATCTGCCCTCACATAGTCAACTGTTCGGTTCTTTTTGGAGCTATTGTATCATGGGGTTTTCTTTGGCCACTGATTACTACATATGCAGGAGATTGGTATCCAGCTGATCTTGGCAGCAATGACTTCAAAGGTCTCTATGGCTATAAGGTCTTTATATCCATTGCCCTTATTCTTGGAGATGGTCTTTACAATCTGGTTAAGATAATATTCATCTCCCTTAAGGCGTTGTTGAACAGCCGCACTAAGCAACAAAATCTTCCTGTAACACACGAGATTCTAGATGCGGAGACAACTCAACTACAACTCGAAGAAAAAAAACGAGACACCGTTTTCTTAAAAGACAATATACCAACATGGGTTGCAGCATCCGGATACATAGCCTTAGTAGGAATATCCATGGCTACAATGCCACTCATATTCCCACCGCTAAAATGGTACCTCGTCCTATGCTCATACATTATCGCACCTGCATTAGCTTTTTGCAACTCATACGGAACTGGTCTCACTGATTGGAGTCTAGCTTCAACATATGGCAAAATCGGTCTATTCATCATAGCATCATTAGTCGGAAGCGATGGTGGGGTCATAGCTGGTTTAGCTGCATGTGGGGTCATGATGTCAATTGTTTCAACCGCTGCTGATTTAATGCAAGATTTCAAAACTGGCTACCTTACATTATCGTCAGCAAAATCCATGTTTGTGAGTCAGTTAGTCGGAACAGCTATGGGATGCATCATTGCACCACTCACGTTTTGGATGTTTTGGAGCGCGTTCGAAATCGGGACTCCCGATAGTCCTTACAAGGCGCCGTACGCTGTCATATACCGTGAAATGGCTATCCTTGGTGTCGAGGGGTTCTCCGAGCTCCCCAAACATTGTTTGGCTTTATGTTGTGGGTTCTTTGTGGCAGCACTGGTCTTAAATCTTTTGCGAGATTTTACTCCCAAAAAGGTGTCTCAGTTCATACCTATTCCAATGGCAATGGCAGTTCCATTCTATATTGGGGCGTATTTTGCGATCGATATGTTTATCGGAACAGTGATACTCTTTGTGTGGGAGCGAGTGAACAAGAAAGATGCGGAAGATTATGCAGGAGCAGTTGCTTCAGGCTTAATATGTGGGGACGGGATATGGACCATCCCATCAGCTATACTCTCGATTCTAAGGGTTGATCCACCAATCTGCATGTACTTCGGACCGTCTGTGAGTTCCTGA | 2022 | 43.18 | MGSEITEPFLTDSSSEQPKQPDNDDLESIPEWKDQITLRGLIVSALLGTLFCIITHKLNLTVGIIPSLNVAAGLLGFFFVKSWTSVVERFGVVVKPFTRQENTVIQTCVVACYGLAFSGGFGSYLLSMDERTYNLIGADYPGNRAEDVKNPGLLWMMGFIFVVSFLGLFSLVPLRKVMVMDYKLTYPSGTATAMLINSFHTTTGAELARKQVNCLGKYLSISFVWSCFKWFFSGVGDACGFDNFPSFGLMLYNNTFYFDFSPTYVGCGLICPHIVNCSVLFGAIVSWGFLWPLITTYAGDWYPADLGSNDFKGLYGYKVFISIALILGDGLYNLVKIIFISLKALLNSRTKQQNLPVTHEILDAETTQLQLEEKKRDTVFLKDNIPTWVAASGYIALVGISMATMPLIFPPLKWYLVLCSYIIAPALAFCNSYGTGLTDWSLASTYGKIGLFIIASLVGSDGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLVGTAMGCIIAPLTFWMFWSAFEIGTPDSPYKAPYAVIYREMAILGVEGFSELPKHCLALCCGFFVAALVLNLLRDFTPKKVSQFIPIPMAMAVPFYIGAYFAIDMFIGTVILFVWERVNKKDAEDYAGAVASGLICGDGIWTIPSAILSILRVDPPICMYFGPSVSS | 673 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo26g01615 | 673 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
| Chmo26g01615 | 673 | Pfam | OPT oligopeptide transporter protein | 35 | 654 | IPR004813 | GO:0035673(InterPro) | |
| Chmo26g01615 | 673 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Chmo26g01615 | 673 | PANTHER | OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED | 16 | 669 | IPR045035 | GO:0016020(PANTHER)|GO:0035673(InterPro) | |
| Chmo26g01615 | 673 | NCBIfam | OPT family oligopeptide transporter | 34 | 651 | IPR004813 | GO:0035673(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo26g01615 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr26:134995967 | Chmo27g02517 | Chmo-Chr27:164639422 | dispersed | |
| Chmo | Chmo-Chr25:125683958 | Chmo26g01615 | Chmo-Chr26:134995967 | wgd | |
| Chmo | Chmo-Chr26:134995967 | Chmo27g01448 | Chmo-Chr27:112682180 | wgd | |
| Chmo | Chmo-Chr26:134995967 | Chmo4g02139 | Chmo-Chr4:145539146 | wgd | |
| Chmo | Chmo-Chr26:134995967 | Chmo5g02012 | Chmo-Chr5:144010402 | wgd | |
| Chmo | Chmo-Chr26:134995967 | Chmo6g01621 | Chmo-Chr6:126259504 | wgd |