Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo26g01630 | ATGGGGTGTGCGGTTTCTGTTTATAGAGTTGGAGGCAATAAGAAGCAACTGAAGATCCCTCTAGTTACTGTACTTGTTCCTTCTATTCGTATTCCGACCGCCTCCAATATTCAAAAGCCTCTTAAAGGACTTGTTCCTAAGGATCTTGCTGATCGTCTGACTTCTTTACGTAACCAAATCTTTCTTCTGGCCGAGCAAACTGATGTTTCAGCTGTTCCTGAATTGTTACGCGCATTGGAGGAATACATGTCACTATTAGTTGGCCTCACTGATCCAGAACTTGGGTGTCGAGAACTGATTGAATTCAAATGGAAGAGTCTAGACGATGGACAAAAAGAAATATGCATTGCTGATTCGTGGTTTGAATTGCTATCGGTTGTTCATATGATGGCTATGTTGACATTAATGGAGGCAAATTCAAAATTGATACCTGATCAAACTGTTTCAAGATACTTACAATTCTGTCTTCGTGAAATTCTAGTCCAAATTCCACCTCATATTAAGATGAAGCTGCCTGTAGATTTGCAGGAGAGTGTAATCGAGGCTGCTTATATTCAAGCACTGGGGCAGGGAACAGAAATGCAGCTTGCTTCAGCTGTTGGAAGTAAAAATGCCACTTTATCTGTTAAAAGAAGATTAGCATGCGAGCAACTAAGATATTTCAGCCAGGCTCATTACTGCTTGTCGACATGTGACAACCTTAACGGATATGGAAAGAAGCATCTGTCATTTATCAAATGGAAGTACCTTGAAGCAAAGGCTGCAGCCTACTATTATCATGGTCTGATCACGGACAAAGGTACCGAACCATCATGCCATATTAGTGCAGTGTGCTGTTTTCTAGCAGCTGAAGAGATTCTAAAAGAGAGCAAGAAGGCTTGTTTAAACTTTTGCCTAACGCTTCCTATAACAAGGGCTCCTGCTGCATGGGGTGCCATGAAGCATTTGAATAAGAAAATTCCTGAAACCGCAGCTAAAAAGTCTCAAATGTACGCGTACCTTCTAGAGGAAGAAAAGAGTTTGGACGTGCTGCCCGACCTACCTGAGTTTGAGTTATCATTAAAAGCAGACGAGTATCAAATGCCCAATAAAGATGCAGCATGGGAGAGTGAAAAATGGGTTATACCTAATCAGACGCTTAAAACTCACTTAACCGACGACGAAGAAGATGATTAG | 1176 | 41.41 | MGCAVSVYRVGGNKKQLKIPLVTVLVPSIRIPTASNIQKPLKGLVPKDLADRLTSLRNQIFLLAEQTDVSAVPELLRALEEYMSLLVGLTDPELGCRELIEFKWKSLDDGQKEICIADSWFELLSVVHMMAMLTLMEANSKLIPDQTVSRYLQFCLREILVQIPPHIKMKLPVDLQESVIEAAYIQALGQGTEMQLASAVGSKNATLSVKRRLACEQLRYFSQAHYCLSTCDNLNGYGKKHLSFIKWKYLEAKAAAYYYHGLITDKGTEPSCHISAVCCFLAAEEILKESKKACLNFCLTLPITRAPAAWGAMKHLNKKIPETAAKKSQMYAYLLEEEKSLDVLPDLPEFELSLKADEYQMPNKDAAWESEKWVIPNQTLKTHLTDDEEDD | 391 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo26g01630 | 391 | CDD | BRO1-Alix-like | 10 | 355 | - | - | |
| Chmo26g01630 | 391 | Gene3D | alix-aip1 like domains | 45 | 375 | IPR038499 | - | |
| Chmo26g01630 | 391 | PANTHER | UNCHARACTERIZED | 14 | 381 | IPR038898 | - | |
| Chmo26g01630 | 391 | SMART | BRO1-2 | 23 | 380 | IPR004328 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo26g01630 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr26:135489383 | Chmo8g00985 | Chmo-Chr8:58765158 | dispersed | |
| Chmo | Chmo-Chr26:135489383 | Chmo26g01631 | Chmo-Chr26:135528860 | tandem | |
| Chmo | Chmo-Chr25:126457105 | Chmo26g01630 | Chmo-Chr26:135489383 | wgd | |
| Chmo | Chmo-Chr26:135489383 | Chmo27g01472 | Chmo-Chr27:113829174 | wgd |