Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chmo27g01204 | ATGGAAAACGACTTCGATCGACTTCTCTTCTTCGAACACGCCCGCCGTACTGCCGAACTCACTTACACCAAAAACCCACTCGATACCGAGAATTTAACTAGATGGGCAGGCGCGTTGCTCGAATTATCCACTTTTCAATCTGTTCAGGATTCCAAACTTATGATCAAAGCTGCGATATCGAAATTGGATGAAGCGTTAAAGATTGATCCGAGGAAACATGATACGTTGTGGTGTATGGGAAATGCGCAAACTTCTTATGCTTTTTTGACTCGTGACGAGGACGAAGCTAAGGGTTATTTTGATTCGGCGTATGTTTACTTTCAGCAGGCTGTTGAAGAGGATCCGGGGAACACACTTTACCGCAAGTCATTGGAAGTGGCTGTAAAGGCTCCTGAATTACATGCTGAGCTCCATAAACAGGGATCTATTCAACAAGCTATGGGACCAGTGGCAGGAGGTGGTCCTTCGACCTCTTCTAGTATCAAGGTATCTAGGGCATACACTTCATGGCATGCATGTGGACATATCATAGAGTCGCGGTGA | 543 | 45.67 | MENDFDRLLFFEHARRTAELTYTKNPLDTENLTRWAGALLELSTFQSVQDSKLMIKAAISKLDEALKIDPRKHDTLWCMGNAQTSYAFLTRDEDEAKGYFDSAYVYFQQAVEEDPGNTLYRKSLEVAVKAPELHAELHKQGSIQQAMGPVAGGGPSTSSSIKVSRAYTSWHACGHIIESR | 180 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chmo27g01204 | 180 | PANTHER | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED | 2 | 160 | IPR010547 | GO:0005742(InterPro)|GO:0045040(InterPro) | |
| Chmo27g01204 | 180 | Pfam | Plant specific mitochondrial import receptor subunit TOM20 | 5 | 177 | - | - | |
| Chmo27g01204 | 180 | Gene3D | Tetratricopeptide repeat domain | 1 | 147 | IPR011990 | GO:0005515(InterPro) | |
| Chmo27g01204 | 180 | SUPERFAMILY | TPR-like | 11 | 127 | IPR011990 | GO:0005515(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chmo27g01204 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 56784 | Chmo27g01204 | Chmo7g02856 | |
| 56785 | Chmo27g01204 | Chmo7g03017 | |
| 56786 | Chmo27g01204 | Chmo8g02992 | |
| 56787 | Chmo27g01204 | Chmo9g03037 | |
| 221064 | Chmo26g01591 | Chmo27g01204 | |
| 230707 | Chmo27g01204 | Chmo26g01591 | |
| 246125 | Chmo27g01204 | Chmo25g01464 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chmo | Chmo-Chr26:183110536 | Chmo27g01204 | Chmo-Chr27:98734825 | dispersed | |
| Chmo | Chmo-Chr27:98734825 | Chmo27g02708 | Chmo-Chr27:174078317 | dispersed | |
| Chmo | Chmo-Chr25:122253931 | Chmo27g01204 | Chmo-Chr27:98734825 | wgd | |
| Chmo | Chmo-Chr26:133214522 | Chmo27g01204 | Chmo-Chr27:98734825 | wgd | |
| Chmo | Chmo-Chr27:98734825 | Chmo7g02856 | Chmo-Chr7:187022208 | wgd | |
| Chmo | Chmo-Chr27:98734825 | Chmo8g02992 | Chmo-Chr8:193099245 | wgd | |
| Chmo | Chmo-Chr27:98734825 | Chmo9g03037 | Chmo-Chr9:193985954 | wgd |